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scn_reactorb_scaffold_6725_122

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 126929..128821

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBI0_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 640.0
  • Bit_score: 808
  • Evalue 4.20e-231
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 640.0
  • Bit_score: 808
  • Evalue 1.20e-231
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 640.0
  • Bit_score: 808
  • Evalue 5.90e-231

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGCCCGAACCCATCGACTGGCTCCCTGACGGAGCCCCCTATAGCCCGCGCTTCGGCGACCGTTACCACAGCAGCGCCAACCACGGCGTGGACCAGGCGCGCGACGCCTTCCTCGGCGGCTGCGGCCTGCCCGCCGCCTGGGCCGGGCAGGCGCAGTGGCGCATCCTGGAAACCGGCTTCGGCCTGGGACTGAACTTCCTCGTGACCTGGGCCGCCTGGCGCGCCGACCCGGCACGCCCGCGCGTGCTGCATTTCGTCTCGTGCGAGGCCTGGCCCGTGGCCGAGGCCGACCTGCTGCGTGCCGCGCCGCAGGCGCCCGAACTGCAGCCGCTGGCCCAGCAACTGGCCGCGCAGTTCTGGGGCTTGCTGCCCGGCGTGCATCGCCTCTCGTTCGAGGGCGGGCAGGTGCTGCTCACGCTCTACATCGGCGACGCCCAGGCCATGCTGCGCCAGCAGCAGCCCGTGGCCGACGCGGTGTACCTGGACGGTTTCAGCCCGCAGTGCAACCCCGACATGTGGGGCGAAGGCTTGCTCAAGGCCGTGGCGCGCTGCTGCCGCCGCGGCACGCGCCTGGCCACCTGGAGCGTGGCCAGCGCCGTGCGCGCCGGGCTGGCGCAGTGCGGCTTCGAAGTGCGCAAGGTGCCCGGCGTACATCCGAAGCGCGACAACCTGCAGGCCACCTTCGACCCGCCCTGGCAGCCCCGGGGCGCCGCGGACGCGCCCGCGCCGCTGTTCAGCGCGCCCTCGCGCTGCGTCGTCATCGGCGCCGGCCTGGCGGGCGCGGGCGCCGCCGCCAGCTTGGCGCGGCGCGGCTGGCAGGTCGAGGTGCTGGACCAGGGCGCGGCGCCCGCCGCCGGGGCCTCGGGCCTGCCCGCCGGGGTGTTCGGCCTGCACGTCTCGCCCGACGACGCCCCGCAATCGCGCCTGAGCCGCGCCGGCCTGCGCCTGACGCGCCAGACCGCGCAGGAACTGCTCGCCGAAGGCGTGGACTGGGCGCCCAGCGGCGTGCTGGAGCACTGCGTGGACGGGAAGCGCGGCCTGCCCGCCGCCTGGAGCGAAGACGCCGCCCACCCCGGCAGCGACTGGAGCCGCTACGCCGATGCGGCGCAACTGGCCGCCGCAGGCCTGCCCGCCGCCGCCGTCGGCCACTGGCACGCGCGCGGCGGCTGGATACGGCCCGCGCGGCTCATCGCGGCGCTGCTGGCCCGGCCCGGCATCACCTGGCGCGGCGGCGCGGCGGTGGCGCGCATCGCGCGCGCGGGCGATGGTGCATGGCGCCTGTTCGATGCGCAGGGCGCCCTGCTGGCCGAAGCGTCGCTGGTCGTCATCGCCACCGGCGCGGGCAGCATCGGCCTGTGCGCCGGTTACTGGCCTGCCGCGTCGCTGCGCCCGCTGCGCGGGCAGGTGAGCTGGGGCCGCTGCGCCGACGCGCCCGCCCTGCCCCCCTTCCCCGTGAACGGCCACGGCAACCTGGTGCCCTGCGCGCCGGACGCGGACGGCCCGATCTGGGTACTGGGCTCGACCTTCGAGCGCGGCCAGACAGCACTGCCCAAGACTGCCGACGAACTGGCCGCCGGCCGCGCCTACAACCTGGAGCGCCTGCGCGGCCTGCTGCCGGGCCTGCGGGCGCCGATGGCGCAACGCTTCCAGACGCCCGGCGCCGTGCACGACTGGTCCGCCGTGCGCTGCGCCGCGCCCGACCGCCGCCCCGTCGTCGGCCCCATCGACCCGCAGGCGCTTCCGGGCCTGTGCATCAGCACCGCGCTGGGCGCGCGCGGGCTGACCAACGCGCTGCTGTGCGGCGAACTTCTGGCCGCGCAGGTGCACGCCGAGCCACTGCCGCTGGAGGCCAAGGTGGCGCAGGCGCTGGCGGCGCAGCGGCTGCGGGGGTAG
PROTEIN sequence
Length: 631
MPEPIDWLPDGAPYSPRFGDRYHSSANHGVDQARDAFLGGCGLPAAWAGQAQWRILETGFGLGLNFLVTWAAWRADPARPRVLHFVSCEAWPVAEADLLRAAPQAPELQPLAQQLAAQFWGLLPGVHRLSFEGGQVLLTLYIGDAQAMLRQQQPVADAVYLDGFSPQCNPDMWGEGLLKAVARCCRRGTRLATWSVASAVRAGLAQCGFEVRKVPGVHPKRDNLQATFDPPWQPRGAADAPAPLFSAPSRCVVIGAGLAGAGAAASLARRGWQVEVLDQGAAPAAGASGLPAGVFGLHVSPDDAPQSRLSRAGLRLTRQTAQELLAEGVDWAPSGVLEHCVDGKRGLPAAWSEDAAHPGSDWSRYADAAQLAAAGLPAAAVGHWHARGGWIRPARLIAALLARPGITWRGGAAVARIARAGDGAWRLFDAQGALLAEASLVVIATGAGSIGLCAGYWPAASLRPLRGQVSWGRCADAPALPPFPVNGHGNLVPCAPDADGPIWVLGSTFERGQTALPKTADELAAGRAYNLERLRGLLPGLRAPMAQRFQTPGAVHDWSAVRCAAPDRRPVVGPIDPQALPGLCISTALGARGLTNALLCGELLAAQVHAEPLPLEAKVAQALAAQRLRG*