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scn_reactorb_scaffold_5724_43

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(57148..58680)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D1622 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 516.0
  • Bit_score: 758
  • Evalue 4.10e-216
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 516.0
  • Bit_score: 758
  • Evalue 5.70e-216
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 528.0
  • Bit_score: 741
  • Evalue 1.50e-211

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGCAGCCCAGCCTGTCGCTGCGCGTTTCGCAGCATCTCGCCCTCACGCCGCAGCTGCAGCAGTCGATCCGCCTGCTGCAGCTGTCCACGCTGGAAATGGCCCAGGAAGTCGAGCAGATGCTGGGCGACAACCCGTTCCTGGAGCGCGAGGACGACGAGGGCCCGCCGCACGAGCCCCCGCCCGAGCCCCCGCGTGCCAGTGCCGCCGCCACGGAGGCCGATGATGCTCCTGTTTCAGGAGCTGCCGACGCGCTCCCGGAAAGCGCAGAAGGCCAAAATGACGACTATGCGCCGAGCGACTGGGAAGGCGACGGCGGCGTCGATGCCGCGCACAGCGACGGCGAGTGGGGCGGCGAGTCCGCGCCGCGCACGCGCGGCCAGGACGACGACGGGCTCGACGTGTTCGAGCGCGCGCAGGGCCAGGAATCGCTCACCGCGCACCTGCACCGCCAGGCCCTGGGCCTGCGCCTGCAGGAGGCGGACCGTGCGGCGCTGTATTTCCTGATCGAGTCGCTCAACGACGACGGCTACCTCGAAGACACGCTCGAAGAATTGGCCGAGGGCCTGGCGGGTAGCGAGGACCTGGAGCAGCGCGAGGAACTGCTGCACCACTTCACCGTGGCGCTGCGCCTGCTGCAGAGCCTGGAGCCCACCGGCGTGGGCGCGCGCGACCTGACCGAATGCCTGGTGCTGCAGTTGCGCGCGCTGCAGGACGCCGAAGAGGCCGACCCCGCCGTGCTGCAGACCGCGCTGGCCCTGTGCGCCCAGCCGCTGGAGCTGCTGGCCCGGCGCGACGTGCGCCGCCTGGCCCAGGCCAGCGGCGCGGGCGAGGAGGGCACGCGCGCCGCCATGGCGCTGATCGCGCGCCTGGAGCCGCGCCCGGGCCGGCGCTTCGCCGACGTGCAGCGCAACATCGTCGTGCCCGACGTGATCGTGAAGAAGGCCGGCCAGGGTTTCAGCGTGCAGCTCAACCCCGACGTGATGCCGCGCCTGCGCGTGCACGAGGTCTATGCCAGCGCCCTGCGCGGGCAGCGCGGCCAGGACGGCCACCAGGCGCTGCAGGCGCGGCTGCAGGAGGCGCGCTGGTTCATCAAGAACATCCAGCAGCGCTTCGACACCATCCTGCGCGTATCGCAGGCCATTGTCGAGCGGCAGAAGAACTTCTTCGTGCACGGCGAAATCGCCATGCGCCCGCTGGTGCTGCGCGAGATCGCCGACGAGCTGGGCCTGCACGAATCGACCATCTCGCGCGTGACCACGGCCAAGTACATGGCCACGCCGCAGGGCACCTACGAGCTGAAATACTTCTTCGGCTCGGGCCTGGGCACCGATACCGGCGGCAACGCCTCCAGCACGGCGGTGCGTGCGCTCATCAAGCAGTTCGTCGCGGCCGAGAACCCCGCCAAGCCGCTGTCGGACAGCCAGATCGCCGAGATGCTCAAGGAGCAGGGCATCGAGTGCGCGCGCCGCACGGTGGCCAAATACCGCGAGGCGTTGAAGATCGCGCCCGCCAACCTGCGCAAGACCCTCTGA
PROTEIN sequence
Length: 511
MQPSLSLRVSQHLALTPQLQQSIRLLQLSTLEMAQEVEQMLGDNPFLEREDDEGPPHEPPPEPPRASAAATEADDAPVSGAADALPESAEGQNDDYAPSDWEGDGGVDAAHSDGEWGGESAPRTRGQDDDGLDVFERAQGQESLTAHLHRQALGLRLQEADRAALYFLIESLNDDGYLEDTLEELAEGLAGSEDLEQREELLHHFTVALRLLQSLEPTGVGARDLTECLVLQLRALQDAEEADPAVLQTALALCAQPLELLARRDVRRLAQASGAGEEGTRAAMALIARLEPRPGRRFADVQRNIVVPDVIVKKAGQGFSVQLNPDVMPRLRVHEVYASALRGQRGQDGHQALQARLQEARWFIKNIQQRFDTILRVSQAIVERQKNFFVHGEIAMRPLVLREIADELGLHESTISRVTTAKYMATPQGTYELKYFFGSGLGTDTGGNASSTAVRALIKQFVAAENPAKPLSDSQIAEMLKEQGIECARRTVAKYREALKIAPANLRKTL*