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scn_reactorb_scaffold_5724_53

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 66717..67265

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B285_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 166.0
  • Bit_score: 269
  • Evalue 1.60e-69
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 166.0
  • Bit_score: 269
  • Evalue 4.40e-70
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EZP49819.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 166.0
  • Bit_score: 269
  • Evalue 2.20e-69

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCCGTGCCGCACCCGCCCATCGACCCTCTGCACCGCGCCCAGCAGCTCTACGCCGGGCACCACGCATGGCTGCTGTCGCGCCTGCAGGCGCGCCTGCGCAACACGGCCGAGGCGCAGGACGTGGCATCGGAGACCTTCCTGCGCGCGCTCACCGCGCGCCAGGCCAGCGTGGTGGAGGAGCCGCGCGCCTTCCTCACCACCATCGCCAAGCGCCTGCTGTTCACGCTGTGGCAGCGGCGCGAGCTGGAGCGCGCCTACCTGGACGCCCTGGCCCAGCAGCCCGAGGCGCTGGCCCCCTCGCCCGAGGAGCGCGCCGTGCTGCTGGAAACCCTGGAGACCGTCGCCAACGCCCTGGAAGGCCTGCCGCTGAAGGCGCGCCAGGCCTTCCTGCTGAGCCAGGTCGACGGCCTGACCTACGAGGCGATCGCCCAGCAGCTGGACATTTCGCAGAGCACCGTGCGGCGCCACATGGCCGAGGGCTTTCGCCGCATCTCCATCGCCCTGGCGCGCCAGCAGGCCGGCATCGCCGCGCCGTGCAGGGCCTGA
PROTEIN sequence
Length: 183
MSVPHPPIDPLHRAQQLYAGHHAWLLSRLQARLRNTAEAQDVASETFLRALTARQASVVEEPRAFLTTIAKRLLFTLWQRRELERAYLDALAQQPEALAPSPEERAVLLETLETVANALEGLPLKARQAFLLSQVDGLTYEAIAQQLDISQSTVRRHMAEGFRRISIALARQQAGIAAPCRA*