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scn_reactorb_scaffold_25275_23

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(29238..29750)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 167.0
  • Bit_score: 300
  • Evalue 1.10e-78
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 170.0
  • Bit_score: 293
  • Evalue 3.50e-77
Peptide deformylase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TA91_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 167.0
  • Bit_score: 300
  • Evalue 7.70e-79

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCAATTCTTCCGATTCTTTGTTATCCCGATCCGCGCCTGCACAAAGTCGCCCAGCCCGTGCAGGCAGTGGATGCGCGCATCCAGTCGCTGGTCAGCGACATGCTGGCCACCATGTACGACGCGCAGGGCATCGGCCTGGCCGCTACCCAGGTGGACGTGCACGAGCGCGTGGTGGTCATCGACACCTCGGAGGAGCGCAACCAGCCACTGGTGCTGATCAACCCCGAGATCGTCTGGGCCAGCGCCGAGAAGGTGGTGGGCGACGAAGGCTGCCTATCCGTCCCCGGCATCTACGATGGCGTGGAGCGCTCCAGCGCCGTGCACGTGCGCGCCCTCGATGAAAAAGGCGCCGCGCGCGTGATCGAGGCCGAGGGCCTGCTGGCCGTGTGCATGCAGCACGAGATGGACCACCTGCTGGGCAAGGTGTTCGTCGATTACCTCTCGCCGCTCAAGCGCAACCGCATCAAGACCAAGATGCTCAAGCAGCAGCGCGAGGCCACGCGCGCATGA
PROTEIN sequence
Length: 171
MAILPILCYPDPRLHKVAQPVQAVDARIQSLVSDMLATMYDAQGIGLAATQVDVHERVVVIDTSEERNQPLVLINPEIVWASAEKVVGDEGCLSVPGIYDGVERSSAVHVRALDEKGAARVIEAEGLLAVCMQHEMDHLLGKVFVDYLSPLKRNRIKTKMLKQQREATRA*