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scn_reactorb_scaffold_8582_7

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5964..6479)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein L11 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETW6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 165.0
  • Bit_score: 177
  • Evalue 9.90e-42
Ribosomal protein L11 {ECO:0000313|EMBL:EYR82730.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 165.0
  • Bit_score: 177
  • Evalue 1.40e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 168.0
  • Bit_score: 157
  • Evalue 3.00e-36

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGTACATCGGTGCAGTGGCGCCGCGGCAGTCGTTTGTGCAGTGATGTACGGGCTTGCCTACCTGTTTCTGCCGCGCGTGCTGCACTTCCCGGACGACCTTGATTCCGCATTGACATTCTGGGCCGGTGCCATCCTTTTCATTGTCCTTTGGGTCATGGTCGGCATCGGCTTGGTCTCGCGTGGCAGGCGGCTTTCCGCGCAGGACATTCGCGGATCCGCCTATGGTCCACCAAGCCCGCGAATCGCGGTGTATGCCGCCTTCCTGCAGAACACGCTGGAGCAGGCCACTGTCACCATCCTCTTGCTGTTGGCTGTCCTTCTGCTGCTGAGAGGCGAAGCAATGCCGTTTGTTGGCGCATCCGTGATTCTCTTCGCCGTGGGCCGCGTGGCGTTCCTGCGGGGATACCCGGGCGGCGCGGGTACGCGCGCGTTCGGCATGGCCCTGACTGCCCTTCCGAGCGTGGTGGCCTTCGTCGTGGCGGCAGGCTCGGTGATTGCACGCGTCTTGCGATGA
PROTEIN sequence
Length: 172
MVHRCSGAAAVVCAVMYGLAYLFLPRVLHFPDDLDSALTFWAGAILFIVLWVMVGIGLVSRGRRLSAQDIRGSAYGPPSPRIAVYAAFLQNTLEQATVTILLLLAVLLLLRGEAMPFVGASVILFAVGRVAFLRGYPGGAGTRAFGMALTALPSVVAFVVAAGSVIARVLR*