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scn_reactorb_scaffold_27856_30

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(28294..29463)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHU0_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 390.0
  • Bit_score: 518
  • Evalue 5.40e-144
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 390.0
  • Bit_score: 518
  • Evalue 1.50e-144
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACM34799.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 390.0
  • Bit_score: 518
  • Evalue 7.60e-144

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGCAGCGTCTGCAGCGATTGTCTCCTTCTTCCCTGGCCTGGGCCCTGGCGGCGGCGGGCATGCTGGCCCTGGGCGCCTGGCTGCTGCCCGCCGGCGCGTCGCGCGCTGCCGACGAGGCGCAGGCCGGCAAGCCCCGGCCCGCGCTGGCGGTGAATACCGTGGCGCCCGAGCGCGCCACCCTGGCGCTGCGGCTCGCGGCCAACGGCAGCGTGGCCGCGTGGCAGGAGGCCAGCATCGGCGCCGAAAGCAACGGCCTGCGCCTGACCGACGTGCGCGTGAACGTGGGCGACGTGGTGCGCAAGGGCCAGCTGCTCGCCACCTTCGCCGACGACACCGTGCAGGCCGACGTGGCCCAGGCCCGCGCCAGCCTCATGGAAGCGCGCAGCAGCGCCGCCGAGGCCGCCGCGAACGACGAGCGCGCACGCACGCTGCAGGCCACGGGCGCCCTGAGCGCGCAGCAGATCCAGCAGTACGCCACGGCGGGCCAGACGGCGCAGGCGCGCGTCGAGGCGGCGCAGGCGCAACTGCGCGTGCAGCAACTGCGCCTGGCGCACACGCGCGTGCTGGCGCCTGACGACGGCGTGATCTCGGCGCGCATGGCCACCGTGGGCGCCGTGCTGGGGGCGGGCACGGAGCTGTTCCGCATGGTGCGCAAGGGCCGCCTGGAGTGGCGCGCCGAAGTCACGTCGAGCGACCTGCCGCGCATCCGCGCCGGGGCCGGGGCGCGCGTCACCGCCGCCAGCGGGGCCGAGGTGGCGGGCAAGGTGCGCATGGTGGCGCCCACGGTGGACCCGGCCACGCGCAATGCGCTGGTGTACGTGGACCTGCCGGCGCATGCCGACATCCGTGCGGGCATGTTCGCGCGCGGCGAATTCCTGCTGGGCGAGCGCAGCGCGCTCACCGTGCCGCAGTCGGCCCTGGTGGTGCGCGACGGCTTCAGCCACGTGTTCGAGGTGGTCGAGGGCAGCCGCGTGGCCATGCGCCGCGTGCAGACCGGCGAGCGTGCGGGCGCGCGCGTGGAGGTGCTGTCGGGCCTGGCCGAGGGCGCCGCCGTGGTGGCGCGCGGCGGCGCCTTCCTGAACGATGGCGATCTGGTGCGCGTGGAACCGAATTCCAAGCCAAAACAGCCTCTAGCGCCCTCTGGTCAAGCGCAAGCAGCTAGCAAATAA
PROTEIN sequence
Length: 390
MQRLQRLSPSSLAWALAAAGMLALGAWLLPAGASRAADEAQAGKPRPALAVNTVAPERATLALRLAANGSVAAWQEASIGAESNGLRLTDVRVNVGDVVRKGQLLATFADDTVQADVAQARASLMEARSSAAEAAANDERARTLQATGALSAQQIQQYATAGQTAQARVEAAQAQLRVQQLRLAHTRVLAPDDGVISARMATVGAVLGAGTELFRMVRKGRLEWRAEVTSSDLPRIRAGAGARVTAASGAEVAGKVRMVAPTVDPATRNALVYVDLPAHADIRAGMFARGEFLLGERSALTVPQSALVVRDGFSHVFEVVEGSRVAMRRVQTGERAGARVEVLSGLAEGAAVVARGGAFLNDGDLVRVEPNSKPKQPLAPSGQAQAASK*