ggKbase home page

scn_reactorb_scaffold_43168_54

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 70356..71387

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 337.0
  • Bit_score: 549
  • Evalue 2.70e-153
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 337.0
  • Bit_score: 549
  • Evalue 1.90e-153
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 337.0
  • Bit_score: 549
  • Evalue 5.40e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GTGAAACACATTATAGAGGGCAAACCAAGTCCTGCCCCGGCGGCCCGTCTTGTCGCGGTGGACGCCGAGTCGGGCGGCCAGCGCCTGGACAACTTCCTGTTGCGCCAGCTCAAGGGCGTTCCCAAGACCCACGTCTACCGCATCATCCGCAGCGGCGAGGTGCGCGTGAACAAGGGCCGTGCCAGCGCCGACACGCGCGTGGCCGAGGGCGACCAGGTGCGCCTGCCGCCCGTGCGCGTCTCGGAGAAGGTGGCGCTCAAGGCCGGGCACCCGGCGCCGGCGCGCGAGTTTCCGCTGCTGCTGGAGGACGAGCACCTGATCGCCATCGACAAGCCCGCGGGCGTGGCCGTGCATGGCGGCAGCGGGGTCAGCTTCGGCGTGATCGAGCAGTTGCGCCAGGCGCGCCCGCAGGCGAAGTTCCTGGAACTCGTGCACCGGCTCGACCGCGAGACCTCGGGCATCCTGCTGGTGGCCAAGAAGCGCTCGGCGCTGAACCAGTTGCAGGACCAGTTCCGCGAGCGCGCGACGGGCAAGACCTACCTCGCGCTGGTGCAGGGCGCCTGGCCTGCCGGCAACAAGGTGATCGACCTGCCCCTGCATAAGTACCTGCTGCCCGACGGCGAGCGCCGCGTGCGCGTCACCACGCCCGAGGACCCGGACGGCATGCGTTCGGTCACGCTGGTGAAAGTGCGTGCGCACCTGGCGCCCCGGCCCTTGCAGGGCCTGCCCGCCATGACGCTGCTGGAGGTGACGATCAAGACCGGCCGCACGCACCAGATCCGCGTGCACCTGGCGAGCCAGGGGCACCCGATCGCGGGCGACGACAAGTACGGCGACTTCGACCTCAACAAGCGCCTGCCCCGGCAGGGACTCAAGCGCATGTTCCTGCACGCCTGGCGCCTGCAGTTCAACCACCCCGCCAGCGGCGAGCGCGTGACATTGCATGCCGCGCTGCCGCCCGAGCTGGCGGATTTCATCGACCCCACCGCCCTGGGAAGCCACCATGCCCGCCAACCGACCGCGCCGCTTTGA
PROTEIN sequence
Length: 344
VKHIIEGKPSPAPAARLVAVDAESGGQRLDNFLLRQLKGVPKTHVYRIIRSGEVRVNKGRASADTRVAEGDQVRLPPVRVSEKVALKAGHPAPAREFPLLLEDEHLIAIDKPAGVAVHGGSGVSFGVIEQLRQARPQAKFLELVHRLDRETSGILLVAKKRSALNQLQDQFRERATGKTYLALVQGAWPAGNKVIDLPLHKYLLPDGERRVRVTTPEDPDGMRSVTLVKVRAHLAPRPLQGLPAMTLLEVTIKTGRTHQIRVHLASQGHPIAGDDKYGDFDLNKRLPRQGLKRMFLHAWRLQFNHPASGERVTLHAALPPELADFIDPTALGSHHARQPTAPL*