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scn_reactorb_scaffold_35772_62

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(63039..63722)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UX42_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 201
  • Evalue 8.50e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 201
  • Evalue 2.40e-49
TetR family transcriptional regulator {ECO:0000313|EMBL:ADU37678.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 206.0
  • Bit_score: 201
  • Evalue 1.20e-48

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACACGACCTCCCCCGCCCGCGCCGGACAAGGCCCCTCCCGCCGCGCCGCGCGCGCGCCGCGGCGACAAGGAACTGCAGGCGCGCCGGCGCGACCTGCTGGCCGCCGCGCGCAAGCTGCTGCGCAAGGGCGGCGCGCAGGCGGTGACGATGCGCACCGTGGCCGATCTGGTGGGGGTCTCCACCACGGTGGTGTACGCGCTCTTTCCCGACAAGGCGGCGCTGATCGCGCAGGCCGTGGACGACGACCTCAAGCGCTTCTCGCGCCACCTGCAGCAGGCGCTGGCGCAGGCCAGCGACGCGCGCGACGCGCTGCGCCAGGTGGCGCGCGCGTACGCTGCCTTCGGCGTGGCGCACCCGCAGGCCTACCGGCTGATGTTCATGGAAGCCCGGCCCGCCTCGCCGGTGGAGGATTCATCGATCGAATTCGGCAACCCGAGCGAGGACGCCTACGCTCTGGCGCGCACGCTGGCCGATGGCCTGCTGCGCGAGGCGGGCGGCCCGCCGCCCGCACAGGCCGACATCGACACCACAGCCCAGCTGGTGTGGGAGGCGCTGCACGGCGTGACCTCGCTGCGCATCACGCTGGGCGACGACCCGTGGTTCGCGCGCCTGCCGCTGGAGCAGCACATCGACCGCATGGTGGACATCTTCGCGGCGGGGGTGCAGGGCCGCAGCCGTTGA
PROTEIN sequence
Length: 228
MTRPPPPAPDKAPPAAPRARRGDKELQARRRDLLAAARKLLRKGGAQAVTMRTVADLVGVSTTVVYALFPDKAALIAQAVDDDLKRFSRHLQQALAQASDARDALRQVARAYAAFGVAHPQAYRLMFMEARPASPVEDSSIEFGNPSEDAYALARTLADGLLREAGGPPPAQADIDTTAQLVWEALHGVTSLRITLGDDPWFARLPLEQHIDRMVDIFAAGVQGRSR*