ggKbase home page

scn_reactorb_scaffold_64800_15

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 13440..13850

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 133.0
  • Bit_score: 244
  • Evalue 5.60e-62
pirin n=1 Tax=Curvibacter lanceolatus RepID=UPI000371AB63 similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 137.0
  • Bit_score: 240
  • Evalue 5.80e-61
predicted nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 133.0
  • Bit_score: 244
  • Evalue 1.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonadaceae bacterium A1 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGCTGCGCTACCTGCTGGACACCAACATCGTCATCTACGTGCTGAAGCGGCGCCCTGTCGAGGTCCTGTCCACCTTCAACGCCCACGCCAGCCGCATGGCGATTTCCTCCATCACGCTGGCCGAGCTGTTGCACGGCGCGGAAAAAAGCAGCCGCGTCAGCGAGAACCTGTCCGCCATCGAGGACTTTTGCAGCCGCCTCCAGGTGCTGCCCTACGGCACCAAGGCCGCCCAGCACTACGGCGCCATCCGTGCCGCCCTGGAGAAGCTGGGCCAGCCCATCGGTGTGAACGACCTGCACATCGCGGGCCACGCGCGCAGCGAGGGCCTGGTGCTGGTCACAAACAACGTCTCGGAATTCGCGCGCGTGCCCGCGCTCGAAGTGGAGAACTGGGTCAACCCCGGCCGGTAA
PROTEIN sequence
Length: 137
MLRYLLDTNIVIYVLKRRPVEVLSTFNAHASRMAISSITLAELLHGAEKSSRVSENLSAIEDFCSRLQVLPYGTKAAQHYGAIRAALEKLGQPIGVNDLHIAGHARSEGLVLVTNNVSEFARVPALEVENWVNPGR*