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scn_reactorb_scaffold_4344_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 4339..4917

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SGC1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 194.0
  • Bit_score: 196
  • Evalue 2.30e-47
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC60198.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 194.0
  • Bit_score: 196
  • Evalue 3.20e-47
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 197.0
  • Bit_score: 164
  • Evalue 2.10e-38

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Taxonomy

Clostridium sp. CAG:448 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGATAACTTAAAAGATATTGTTTCTAAAAATATCATATATCTTCGCACGAATAATAAAATGACACAGCTTGAGTTGGGTGAAGCATTAAGCTATTCTGATAAGGCGGTATCAAAATGGGAGCGTGGCGAAGCAATCCCCGATGCTTATGTTTTGAAAAAACTAAGCACTATTTTTAATGTGTCGGTGGATTATCTGTTGAGTGAACATGATGAAAAGGAATTGAGAACTGTCGAACCCCATAGATTTGACCGCCGTGTTATTTCGCTCATATCCTTTTTAGGTACATGGACACTTGCTATTGTCATTTTTGTTGTGCTATGGATTTTAGGCTCGCTGCAATGGCTTGTATTTATATATGCTTTGCCTGTGTCTCTTATTGTCATGATTGTTTTAACCGCCGTATGGGGCAAGGCGAAGACTAATATTTATTATATATCTTTAGTTATTTGGAGCATTCTCGCCGCCATATACTTCACGTTTCTGAAATATAACTGGTGGCTGATATTTATAATCGGAATTCCGGCACAAATTATTGTATTACTTTGTTTTAGGATTAGAATACGACCTAAAAAGTAG
PROTEIN sequence
Length: 193
MDNLKDIVSKNIIYLRTNNKMTQLELGEALSYSDKAVSKWERGEAIPDAYVLKKLSTIFNVSVDYLLSEHDEKELRTVEPHRFDRRVISLISFLGTWTLAIVIFVVLWILGSLQWLVFIYALPVSLIVMIVLTAVWGKAKTNIYYISLVIWSILAAIYFTFLKYNWWLIFIIGIPAQIIVLLCFRIRIRPKK*