ggKbase home page

scn_reactorb_scaffold_17496_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3655..4188)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor CarD n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRW0_TEPAE similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 155.0
  • Bit_score: 197
  • Evalue 9.60e-48
carD; RNA polymerase-binding transcription factor CarD similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 155.0
  • Bit_score: 197
  • Evalue 2.70e-48
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:CCP27179.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 155.0
  • Bit_score: 197
  • Evalue 1.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tepidanaerobacter acetatoxydans → Tepidanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
ATGAAAGGAATGATTGTTACAATGTATAAATTAGGAGACAGTGTTGTATATCCGATGCACGGTGCAGGAAAAATTGAAGCTGTTGAAGAAAAGGAAATTCTGGGGGAGCTTAAAAAATATTATATTTTAAAAATGCCTATCGGAGAAATAAAATTGATGATACCGGTTGACAATGTAAACAACATGGGATTAAGAAATATTATTAACATAGATGAGGTAAATGAGGTTTTTGATATTTTAAAGCAGGATGCTGAAGATAACAGCTCTAATTGGAATAAAAGATATAGGGAAAACATGGATAAGATGCGAACTGGTGACATTTTTAAGATTGCGCATATAGTTAGAGACCTTTATCACAGAGATAAGGAAAGAGGGTTATCTACAGGTGAAAAGAAGATGCTTTCTAATGCCAAGCAAATGATTGTCAGTGAAATTGCCTTATCAACAAATAAAAATGTAGAGTCTATAACTGAAAGTATAGATAATTTTCTTGATGAAAATATTGAACGCTTACTACAGAAAAACGCTCAGTAA
PROTEIN sequence
Length: 178
MKGMIVTMYKLGDSVVYPMHGAGKIEAVEEKEILGELKKYYILKMPIGEIKLMIPVDNVNNMGLRNIINIDEVNEVFDILKQDAEDNSSNWNKRYRENMDKMRTGDIFKIAHIVRDLYHRDKERGLSTGEKKMLSNAKQMIVSEIALSTNKNVESITESIDNFLDENIERLLQKNAQ*