ggKbase home page

scn_reactorb_scaffold_17496_16

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(13632..14102)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DUR5_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 156.0
  • Bit_score: 188
  • Evalue 5.10e-45
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 157.0
  • Bit_score: 189
  • Evalue 3.20e-45
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 155.0
  • Bit_score: 184
  • Evalue 1.60e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 471
ATGGAAAACAACGTAATATTACTTACAGCCGAAGGTTATGAAGAACTCACAAATGAATTAGAAAATTTAAAATCGGTTAGACGTAAAGAAGTTGCAGAGAAGATTAAAATTGCTTTGTCATTTGGAGATATAAGTGAAAATGCTGAATACGATGAAGCGAAAAATGAACAGGCTCTAGTTGAAAAAAGAGTTGCTAAATTAGAGTCAATCCTGAAGCACGCAAAAATAATTGAAGAGCATAAGCAAAACGGAACTGTAGGTATAGGCTCAAAGGTTAAAATAAGAGACATTGAATTTGACGAGATTATGGAATACAATATAGTTGGTTCAGCTGAGGCTGATCCATTCAGAGGCAAAATATCTAACGTTTCTCCGTTAGGTACAGCTTTGCTGAGCAAAAAAGTAGGCGATATAATTGAAGTCACATCTCCTCATGGAGAAAATATAAAATATGAAATTTTAGAGGTTTAA
PROTEIN sequence
Length: 157
MENNVILLTAEGYEELTNELENLKSVRRKEVAEKIKIALSFGDISENAEYDEAKNEQALVEKRVAKLESILKHAKIIEEHKQNGTVGIGSKVKIRDIEFDEIMEYNIVGSAEADPFRGKISNVSPLGTALLSKKVGDIIEVTSPHGENIKYEILEV*