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scn_reactorb_scaffold_20630_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2159..2638)

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 158.0
  • Bit_score: 212
  • Evalue 7.30e-53
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 158.0
  • Bit_score: 212
  • Evalue 3.60e-52
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DA3552 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 156.0
  • Bit_score: 216
  • Evalue 1.80e-53

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Taxonomy

Peptoniphilus sp. 1-1 → Peptoniphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 480
ATGAGAATAGGAATAGGATATGACGTGCATAGATTAGCTGAAAACAGAAAGCTGGTTATAGGAGGAGTTGAGATTCCTTATGATAAAGGCTTGGACGGACATTCAGATGCAGATGTTCTAATCCATGCTATAATTGACAGCATCTTAGGGGCTATGTCAAAGCGAGACATAGGGTATCTTTTTCCAGATAGTGACGATAGCTACAAGGATATTGACAGTAAGCTTCTGCTGGGAAATGTGGTTGATTTAATGGAGTATATGGGATATAAAATAGGAAATATAGATTGTATCATAATAGCTCAAAATCCTAAAATGTCACCATATATTAATCAAATGCAAGAAGTCTTGTCATACATATTAAAGACAGAAATAGAAAACATAAACATCAAGGCAACTACGACTGAAAAACTAGGCTTTGAGGGTGAAGGCCTTGGTATATCTGCACAAGTTGTTTGTCTGTTGGAAAAAATAATCAAATAA
PROTEIN sequence
Length: 160
MRIGIGYDVHRLAENRKLVIGGVEIPYDKGLDGHSDADVLIHAIIDSILGAMSKRDIGYLFPDSDDSYKDIDSKLLLGNVVDLMEYMGYKIGNIDCIIIAQNPKMSPYINQMQEVLSYILKTEIENINIKATTTEKLGFEGEGLGISAQVVCLLEKIIK*