ggKbase home page

scn_reactorb_scaffold_22221_7

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5393..6094)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHN2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 233.0
  • Bit_score: 366
  • Evalue 1.60e-98
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG29050.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 233.0
  • Bit_score: 366
  • Evalue 2.20e-98
putative ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 230.0
  • Bit_score: 325
  • Evalue 6.70e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTTAACGTTTATAGTGTTACTAAAAAGTATGGTAAGGTGCTTGCTAATGATAAAATCAGCTTTTGTGTTGAGGACGGACAAATTGCAGTGCTTCTTGGACCAAATGGAGCTGGAAAATCAACTATAATAAAGTGTATAGCTGGTTTATTGAGATTTGACGGTGATATAGATATATGCGGGTTTAAAAATAAATCTATTGATGCTAAAAAAGTGTTGGGATATGTTCCGGAGATGCCTGCAATATATGATTTGCTAACGGTATGGGAGCATTTAGAATTTATAGCAAGGGCATATAATCTAACCGATTGGAAGCCTTATGCAGAAGAATTATTGACACGATTTGAGCTTATGGATAAAAAAGATAAGCTTGGCAAGGAGCTGTCTAAAGGAATGCAGCAAAAAGTAAGCATTTGCTGTGCTATATTGCATAAGCCCCGTGTTTTAATTTTTGACGAACCCATGGTTGGTCTTGATCCACATGCTATAAAGGAATTAAAGAATATGTTTGTAGAGATGAAAAATCAAGGCTCCTCTGTTCTCATAAGCACCCATATGCTTGACAGCGTTGAGAATTATTGGGATGTTGCTCACATAATGATGAATGGTTCATTTGCTGCGACAAAATACAATAAAGCAAGCTCAGAGGACGAAAAAACCTTAGAGCAGCTATTCTTTGAAATAACTGAGAGGAAAAACTAA
PROTEIN sequence
Length: 234
MFNVYSVTKKYGKVLANDKISFCVEDGQIAVLLGPNGAGKSTIIKCIAGLLRFDGDIDICGFKNKSIDAKKVLGYVPEMPAIYDLLTVWEHLEFIARAYNLTDWKPYAEELLTRFELMDKKDKLGKELSKGMQQKVSICCAILHKPRVLIFDEPMVGLDPHAIKELKNMFVEMKNQGSSVLISTHMLDSVENYWDVAHIMMNGSFAATKYNKASSEDEKTLEQLFFEITERKN*