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scn_reactorb_scaffold_23969_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1296..2330

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transporter subunit ; ATP-binding component of ABC superfamily n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PW94_CLOSD similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 328.0
  • Bit_score: 503
  • Evalue 9.30e-140
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KDR95684.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 343.0
  • Bit_score: 508
  • Evalue 6.90e-141
oppD; oligopeptide transporter subunit ; ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 328.0
  • Bit_score: 503
  • Evalue 2.60e-140

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Taxonomy

[Clostridium] litorale → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGGCAGATAAATTATTAGAAGTAAAAGATTTAAGGACATCTTTTTTTACACACTTAGGAGAAGTAAAGGCTATAAGAGGTATCAGCTTTCATCTTGATAAGTCAGAGGCAATAGGTATAGTTGGTGAAAGTGGAAGTGGAAAAAGTGTCACTTCTCTCTCAATAATGAAATTATTACAGTATCCTGGAAAAATAGTTGGAGGAGAAATCTTATTTAAGGGAAAAGATTTAGCAAATAAATCCAACAAAGAAATGATGAGTATTAGAGGAAATGAAATAGCAATGATTTTTCAAGATCCTATGACAGCTCTAAATCCAGTTTACACAGTAGGCGATCAGATTTCCGAGGTTATACTAAAGCATCAGAAATTATCAAAAAAGGATGCGTTTAATAAAGCGGTTGATATGCTTAAACTTGTAGGTATCCCTGATCCGGAAAAAAGAATTAAAAGCTATCCGCATGAGTATAGCGGTGGTATGAGACAAAGAGCTATGATTGCAATGGCATTGTCTTGTGAGCCGGATTTATTGATAGCTGATGAGCCTACGACAGCACTTGATGTTACTATACAGGCACAAATATTAAAGCTTATGAAAGACTTAAATAATAAATTAAATACTTCGACAATCCTTATAACTCATGATTTGGGAGTTGTATCTGATGTCTGTTCAAGAATTCTAGTTATGTACGGCGGACTTATAATGGAGCAGGGCTCTAAAAAGGATATATTTTACTCTCCTAGACATCCGTATACTATGGGATTATTAAAATCTATACCAAAGATAGATTCAGAGGAAAAAATAAGACTGGTACCAATACATGGAACACCACCAGATTTGTTAAAGCCACCTACCGGATGTCCATTTTACGCACGCTGTGATTATGCTATGCGTATATGTGCTCAGGAGCAGCCGCCATATTTTTCGAGTGAAAATGAACAGCATCAAACAATGTGCTGGCTACTGCACAATGACGCTCCTAAAAACGAAGATTACGAAAATCAGAAAGGGGGCGTAAGAGGCAATGTCAAATAA
PROTEIN sequence
Length: 345
MADKLLEVKDLRTSFFTHLGEVKAIRGISFHLDKSEAIGIVGESGSGKSVTSLSIMKLLQYPGKIVGGEILFKGKDLANKSNKEMMSIRGNEIAMIFQDPMTALNPVYTVGDQISEVILKHQKLSKKDAFNKAVDMLKLVGIPDPEKRIKSYPHEYSGGMRQRAMIAMALSCEPDLLIADEPTTALDVTIQAQILKLMKDLNNKLNTSTILITHDLGVVSDVCSRILVMYGGLIMEQGSKKDIFYSPRHPYTMGLLKSIPKIDSEEKIRLVPIHGTPPDLLKPPTGCPFYARCDYAMRICAQEQPPYFSSENEQHQTMCWLLHNDAPKNEDYENQKGGVRGNVK*