ggKbase home page

scn_reactorb_scaffold_19781_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1194..1757)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C156_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 187.0
  • Bit_score: 229
  • Evalue 1.40e-57
LysR substrate binding domain protein {ECO:0000313|EMBL:EDS75111.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 187.0
  • Bit_score: 229
  • Evalue 2.00e-57
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 196
  • Evalue 3.70e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] spiroforme → Erysipelatoclostridium → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
CAATACTTCCTAACCCCTTACCTTGTTCTATTTCACAAGCAATACCAAAGCATAAGAATAAAGGTTTTAAACAGAACAAGCTTAGAAATGATTGAGCTTATAAAATCCGGACAAATAGATTTATGCTTTTTAAATATGCCGATAGCTGATGAATCATTGGAAATAAAGGAATGTTTAAAAATACATGATATATTTGTCTCAGCAAATAAAGACGATAAAACTTATTCTAACAAGGAAATAGCTAAAAAACCCCTCATACTTATAGAAAAAAATACCAGCTCAAGACAATTTGTAGACAGACATTTTGCAAAAAGCGGTATATCCCTGCAGCCTAAAATAGAATTAGGTGCTCATGAATTGCTTGTAAAGCTTGCACAGGTTAATTTAGGTATTTCCTGCGTAGTAAAAGAGTTTTCAATGGAATATTTGAATCAAGGCTCAATATATGAAGTAAAGCTAGAAGAAGCATTGCCTGAAAGAAGCATAGCATATGCATACCTAAAGAGAAGAACATTATCGGCATCAGCCACTAAATTTATTGAGCTTTTATTGACTGAAATATAG
PROTEIN sequence
Length: 188
QYFLTPYLVLFHKQYQSIRIKVLNRTSLEMIELIKSGQIDLCFLNMPIADESLEIKECLKIHDIFVSANKDDKTYSNKEIAKKPLILIEKNTSSRQFVDRHFAKSGISLQPKIELGAHELLVKLAQVNLGISCVVKEFSMEYLNQGSIYEVKLEEALPERSIAYAYLKRRTLSASATKFIELLLTEI*