ggKbase home page

scn_reactorb_scaffold_17102_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2858..5020)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 709.0
  • Bit_score: 813
  • Evalue 2.10e-232
topA; DNA topoisomerase 1 (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 706.0
  • Bit_score: 763
  • Evalue 3.90e-218
DNA topoisomerase I n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030F61F4 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 714.0
  • Bit_score: 1003
  • Evalue 6.00e-290

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2163
ATGGAAAAAAAATTAGTAATCGTTGAGTCGCCGGCAAAGGCAAAAACCATAGGAAAATTTCTTGGACCTAACTATGTTGTTAAGGCTTCCGTCGGTCATGTCAGAGATTTGCCTAAAAGCAAGCTCGGCATCAATGTAGAAAATAATTTTGAGCCTGACTATATTACGATAAGAGGCAAAGGCGATATAATCAAGGAGCTAAAAAAAGAAACTAAAAAAGCAAAAGAAGTTTATCTTGCAACAGACCCTGATAGAGAGGGAGAGGCTATATCATGGCATCTGTCAAAGATTCTTAATTTAGATGAAAATAATAAAAATAGAATTGAATTTAATGAGATAACAAAGGATGCTATAAAAAAGGCTGCAAAAAATCCAAGGAAAATAAATACAAGCTTGGTTGATGCACAGCAAGCAAGAAGAATTTTGGACAGACTTGTTGGATATAACATAAGTCCGCTTTTATGGAGAAAAATAGAAAAAGGCTTAAGCGCCGGCAGAGTTCAGTCCGTTGCATTAAAGTTAATATGTGAAAGAGAAAAGGAAATAAATGATTTTGTATCTGAGGAATATTGGGATTTAGATATTGAATTAGTTGAAAAAAAGAAAAAGTTTATTGCAAAATATTACGGCAGATTGGATGAGGACAGTTTAAGTCAAGCCAAAAAGACTGATGCAAAGCCAAAAATAAATAAAGTAAAATTAAAAACAAAGGAAGAAACTGACGCAGTCATAAACAGTATTGATAAAGAAGCCTTACTAGTTTATAAAATAGAGAAGAGCCGCAGCGTTAAAAAGCCTAGTCCACCGTTTACAACCAGTAGCTTACAGCAGGAGGCAAATAAAAAGCTGAATTTTTCATCAAAGAAAACCATGATGATTGCTCAGCAGCTATATGAAGGTATTAATGTAAAAGGCGAGGGAAGTGTTGGTTTAGTAACATATATTAGAACAGATTCATTTAGAATTTCTAATGAGGCCCATGAAAATGTAAAAAATTATATAGTGCAAAGCTATGGACAAAATTATTATTCTCATAATGAATATAGTAAGAAAAGCAAGGTAGAAGCACAGGATGCTCATGAAGCTATAAGACCTACCTATGTTGATAAGAGTCCGGAAAAAATCAAGGATTCATTGACTGCTGATCAATACAAATTGTACAATTTAATTTGGAGAAGATTTATTGCTTCACAAATGGCAGAAGCCTTATTTGACACAACAACAATTATATTTAACAGCAATAATAACATATTCAAATCCTCAGGCAGTATAATGCAGTTTGAGGGCTTTAAAAGGATTTATAATTATAATGATGGTTCAAAGGATATTTTACTTCCTATTATAAATGAGGGAGATTTGGTTAAAATAAATAATGTATTACCAGAACAGCTGTTTACCAATCCTCCTGCTAGATATACAGAGGCTTCATTAATAAAGATAATGGAGGTTTTAGGAATAGGCAGACCAAGTACCTACGCTCCGACTATTATAACAATTACAAATAGGGACTATGTAATTAAGGACAAAAACTATCTGATACCAACTGAAATGGGACTTATAGTAAATGAACTGCTTATAAAATACTTTGAAAATATAATAAATGATAAATTTACAGCTGGACTTGAAAATAAACTAGACGCAGTTGCTAATGGAAATGTTGACTGGCATGAAATTATAAAGGAATTTTACAATGAATTTAAGCTTTCCTTAGATGTTGCAGATAAGGAAATAGAAAAGATTGAGCTAAAGGATGAAGTAAGCACAGAAAAATGCGAAAACTGCGGAGAGTTCATGGTTGTTAAAAAGGGTAGATTTGGTAAATTTTTAGCCTGTCCTAATTATCCGGAATGTAAAACAACTAAAAAACTAGGTCAAAAGGAAGCAGCGGAAGAGACAGATATTGTATGTGAGCTATGCGGAGCTAAGATGCTGAAAAGAAAAGGAAGATTCGGAGACTTCCTAGCCTGTTCAAAGTATCCGGAATGTAAGAATACAAAGCAAATATCTCAAAAAATCGATACTCCTTGTCCAAAATGCGGCAAGGATATAGTAATAAGATTTACAAAAAAAGGCAGGAGATTCTTTGGCTGCAGCGGATATCCGGACTGTGACTTCGTCTCTTGGACTGATCCAAGCAAGAGTGATGATAAGGACGATAAATAG
PROTEIN sequence
Length: 721
MEKKLVIVESPAKAKTIGKFLGPNYVVKASVGHVRDLPKSKLGINVENNFEPDYITIRGKGDIIKELKKETKKAKEVYLATDPDREGEAISWHLSKILNLDENNKNRIEFNEITKDAIKKAAKNPRKINTSLVDAQQARRILDRLVGYNISPLLWRKIEKGLSAGRVQSVALKLICEREKEINDFVSEEYWDLDIELVEKKKKFIAKYYGRLDEDSLSQAKKTDAKPKINKVKLKTKEETDAVINSIDKEALLVYKIEKSRSVKKPSPPFTTSSLQQEANKKLNFSSKKTMMIAQQLYEGINVKGEGSVGLVTYIRTDSFRISNEAHENVKNYIVQSYGQNYYSHNEYSKKSKVEAQDAHEAIRPTYVDKSPEKIKDSLTADQYKLYNLIWRRFIASQMAEALFDTTTIIFNSNNNIFKSSGSIMQFEGFKRIYNYNDGSKDILLPIINEGDLVKINNVLPEQLFTNPPARYTEASLIKIMEVLGIGRPSTYAPTIITITNRDYVIKDKNYLIPTEMGLIVNELLIKYFENIINDKFTAGLENKLDAVANGNVDWHEIIKEFYNEFKLSLDVADKEIEKIELKDEVSTEKCENCGEFMVVKKGRFGKFLACPNYPECKTTKKLGQKEAAEETDIVCELCGAKMLKRKGRFGDFLACSKYPECKNTKQISQKIDTPCPKCGKDIVIRFTKKGRRFFGCSGYPDCDFVSWTDPSKSDDKDDK*