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scn_reactorb_scaffold_37505_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1483..5022

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 1179.0
  • Bit_score: 1770
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 1182.0
  • Bit_score: 1711
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CS66_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 1179.0
  • Bit_score: 1770
  • Evalue 0.0

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3540
TTGATAGAATATAATAATTTTGAATCTATAAGAATTAGCTTGGCATCACCTGAAAAAATAAGACAGTGGTCACGAGGTGAGGTTAAAAAGCCTGAAACCATAAATTATAGAACTTTAAAGCCTGAGAGGGATGGTTTGTTTTGCGAAAAAATATTCGGACCTCAAAAGGATTGGGAATGCCATTGCGGTAAGTACAAAAGAGTAAGATATAAAGGTGTTGTTTGTGACAGGTGTGGAGTTGAAGTCACAAAAGCTAAAGTAAGAAGAGAGAGAATGGGACACATAGAGCTTGCAGCCCCGGTTTCACATATTTGGTATTTTAAAGGAATACCGAGCAGACTTGGACTTATGCTTGATATGTCACCAAGATCCCTTGAAAAGGTGCTTTATTTTGCACAATATGTTGTCACTGATCCAGGCGATACAACATTATCAGAAAAACAGCTGCTAACAGAAATGGAATATAGAGAGTACAGAGAGCATTATAGAAATGCTTTTAAGGCTGATATGGGAGCAGAGGCTATAAAAACTCTTCTTATGAAGATTGACTTAGATAAGGAAACTCTTGAATTAAGAAAAGAGCTTAAAGACAGCAAGGGACAAAAGAAGATAAGAATTACAAGAAGACTTGAGGTTGTAGAAGCCTTCAGAACATCTGGGAATAGACCAGAGTGGATGATTATGGATGTTCTTCCGGTTATACCTCCGGATTTAAGACCAATGGTTCAGCTTGATGGCGGCAGATTTGCTACGTCTGACTTAAATGACTTATACAGAAGAGTAATAAATAGAAATAACAGATTAAAGAAATTACTTGATTTAGGAGCTCCTGATATCATTGTAAGAAATGAAAAAAGAATGCTCCAAGAGGCAGTAGATGCTTTAATTAACAACGGAAGAAGGGGAAGACCAGTAACTGGTCCTGGAAACAGACCTTTAAAATCACTTTCTGATATGCTGAGTGGTAAGCAAGGTAGATTTAGACAAAACCTTCTTGGAAAAAGAGTTGATTATTCAGGACGTTCAGTTATCGTTGTAGGTCCTGAGCTTAAATTATATCAGTGCGGACTTCCTAAGAAAATGGCTCTTGAGCTGTTTAAGCCTTTTGTTATGAAGCAATTGGTTCAAAAAGGAATAGTTCACAATATTAAGAGTGCGAAGAAAAAGGTTGAAAAAATCGATTCTGTTGTATGGGATGTATTAGATGATATAATCAAAGACCATACAGTTATGCTAAATCGTGCTCCTACGCTTCACAGACTTGGTATCCAGTCATTTGAACCAGTTTTGGTTGACGGAAAGGCTATCAAGCTTCATCCACTTGTATGTACAGCATACAACGCGGACTTTGACGGAGACCAAATGGCTGTTCACGTTCCTTTATCAGTAGAGGCACAGGCTGAATCAAGATTTTTGATGCTTTCTGTAAACAACATACTTGCACCAAAGGACGGAAGACCGATAACAACTCCTACTCAGGACATGGTTCTTGGAAGCTATTATTTAACTATGACGCTTAAAGACCATCCGGAGAAAGGCGACGGAATGATCTTCAAGGATTATGATGAAATGCTTTTAGCATATTTTAATGAAGATGTTTCCTTACATGCCAGAGTTAAGGTTAGGTGTTATCTTGGCGAAGAATCAAGACTTGTTGAAAGTACAGTAGGAAGATTTATATTTAATGAAAACATACCTCAAGATTTAGGCTTTGTTAATAGAGAAAAGGATAAATTCTCTCTAGAGATCGACAAAATAGTTACTATGAAAACACTTGAGGAAATAATATATAAATGCTTTAAGAAATATGGAAATTCAATAACTGCTGATGTTATGGATAGAATGAAAGCTACAGGCTTTAAGTTCTCTACAGTTGGAGCCATAACTATAAGTGTTAGCGATATTGAAGTTCCAGAAGAGAAAAAAGAGCTTATAGCTGAGGCGGATGCCAAGGTTATGGAGTACGAGAAGAAATATCGTCGTGGTATAATGACTGACGAAGAAAGATACGAAAATGTAGTTAAGATTTGGAATGATACGACAGAAAAAGTTACAAATGTTTTGATGGAAAGCTTGAAAGAAGATAACAGCTTGTACATCATGTCTGTATCTGGAGCCCGTGGTGGCCGTAACCAGATTAAGCAGTTAGCCGGTATGAGAGGTCTGATGGCCAGCTCAAGCGGTAAAACAGTTGAAATTCCAGTAAAATCTAACTTTAGAGAAGGACTTTCAGTTCTAGAGTTCTTTATTTCGGCTTCCGGTACAAGAAAGAGCTTGACCGATACAGCTTTAAGAACAGCCGACTCAGGTTATTTAACAAGAAGATTGGTTGACGTAAGTCAGGATGTTATTGTCAGAGAGGTTGATTGTGAAACTACTGAAGGTATAGAGGTTGAATCTTTCGTTGACGGAAATGAAAGAATTGAAGAATTAAGAGAAAGAATAACAGAAAGATTTAGTGCTGAGGATATAGTAAACAAAGTTACCGGCGAGGTTTTAGTGAAAGCCGGTGAGATGATAACAGAGGAAATGGCAGGACTATTGCAAAAGCTTTATGAAGAAGAACATGCTGTTGACGTTATCAAAATAAGATCCGTCTTGACCTGTAAAACACATCATGGCGTTTGTTCTAAATGTTATGGTAACAATCTTGCTACCGGTAATTTAATCCAAGTTGGTGGTTCTGTTGGTATAATAGCAGCTCAATCAATAGGTGAGCCAGGTACACAGCTTACAATGCGTACATTCCATACTGGAGGTATTGCAACCGCTGGAGATATCACTCAAGGTCTTCCTCGTATCGAAGAGTTATTTGAGGCGAGAAAACCAAAAGGTTTGTCTATAATTTCTGAAATTTCGGGAAAAGTAAACTTGACTGAAAAGGCAAATAGAAGAGAAGTAATAGTTGTAAACAGCGAACTTGCTGACAGTAGAAATTATTTGATACCTTATGGTTCAAAGCTCTTAGTATCAGATGGCATGGAGATAAAAGCCGGAGAAAAAATAATCGAAGGTTCTATCAATCCTCATGATATCTTGAGAATTAGCGGATTAAAAGCTTTACAATCTTATATTCTTATGGAAGTTCAAAGAGTTTACAGAATGCAGGGTGTTGATATCAATGATAAGCACGTTGAAATTATCATCAGACAGATGATGAACAAGATGAGAGTTGATGAAGCCGGAGATACAATGTTATTACCTGGAAGCTTAGTGTCTATAACTGAATTTGAAGCTGAAAATAAAGCCGCAGAAGAAAAAGGACTAGAGCTTGCTACAGGAGAAAGAGCATTGCTTGGAATCACCAAGGCTTCTCTTGCTACAGAATCATTCTTGGCTTCTGCATCATTCCAAGAGACTACAAGAGTATTGACTGATGCCGCTACTAAAGGCAAGGTTGACAATCTTCTAGGACTTAAGGAGAATGTAATCATAGGCAAGCTAATTCCTGCAGGAACTGGTATGAAGAGATACAGAAATGTAGGAATTGAAGTTGAAGGCTATGAAGAGGAAGAAGCTAAAGAAGAAATTTTAGCATAA
PROTEIN sequence
Length: 1180
LIEYNNFESIRISLASPEKIRQWSRGEVKKPETINYRTLKPERDGLFCEKIFGPQKDWECHCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRLGLMLDMSPRSLEKVLYFAQYVVTDPGDTTLSEKQLLTEMEYREYREHYRNAFKADMGAEAIKTLLMKIDLDKETLELRKELKDSKGQKKIRITRRLEVVEAFRTSGNRPEWMIMDVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALINNGRRGRPVTGPGNRPLKSLSDMLSGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQCGLPKKMALELFKPFVMKQLVQKGIVHNIKSAKKKVEKIDSVVWDVLDDIIKDHTVMLNRAPTLHRLGIQSFEPVLVDGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAESRFLMLSVNNILAPKDGRPITTPTQDMVLGSYYLTMTLKDHPEKGDGMIFKDYDEMLLAYFNEDVSLHARVKVRCYLGEESRLVESTVGRFIFNENIPQDLGFVNREKDKFSLEIDKIVTMKTLEEIIYKCFKKYGNSITADVMDRMKATGFKFSTVGAITISVSDIEVPEEKKELIAEADAKVMEYEKKYRRGIMTDEERYENVVKIWNDTTEKVTNVLMESLKEDNSLYIMSVSGARGGRNQIKQLAGMRGLMASSSGKTVEIPVKSNFREGLSVLEFFISASGTRKSLTDTALRTADSGYLTRRLVDVSQDVIVREVDCETTEGIEVESFVDGNERIEELRERITERFSAEDIVNKVTGEVLVKAGEMITEEMAGLLQKLYEEEHAVDVIKIRSVLTCKTHHGVCSKCYGNNLATGNLIQVGGSVGIIAAQSIGEPGTQLTMRTFHTGGIATAGDITQGLPRIEELFEARKPKGLSIISEISGKVNLTEKANRREVIVVNSELADSRNYLIPYGSKLLVSDGMEIKAGEKIIEGSINPHDILRISGLKALQSYILMEVQRVYRMQGVDINDKHVEIIIRQMMNKMRVDEAGDTMLLPGSLVSITEFEAENKAAEEKGLELATGERALLGITKASLATESFLASASFQETTRVLTDAATKGKVDNLLGLKENVIIGKLIPAGTGMKRYRNVGIEVEGYEEEEAKEEILA*