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scn_reactorb_scaffold_37505_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 5488..5910

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Clostridium difficile CD160 RepID=T3DSW3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 140.0
  • Bit_score: 236
  • Evalue 1.50e-59
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 140.0
  • Bit_score: 236
  • Evalue 2.10e-59
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 140.0
  • Bit_score: 235
  • Evalue 9.30e-60

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 423
ATGCCAACTATTAACCAATTAGTAAGAAAGAGTAGAAAAGCAGTAGAGTACAAATCAAATTCTCCAGCTTTAAATGTGAGTTTAAACACATTAAAGAAGAAAACAAATGAGACAAGTTCACCGCAAAAGAGAGGAGTTTGTACATCTGTTAAAACAGTAACACCTAAGAAGCCTAACTCAGCTTTAAGAAAAATTGCCAGAGTTAGATTAACTAATGGAACTGAAGTAACTGCTTATATTCCAGGTATTGGACATAACTTACAAGAGCACAGCGTTGTTCTTATAAGAGGCGGTAGAGTTAAAGACTTACCGGGAGTTAGATACCACATTGTCAGAGGAACTCTTGATACAGCTGGAGTTAATAAGAGAAATCAATCTAGATCCAAATATGGAACTAAGAAACCAAAAGAAGCTAAAAAATAA
PROTEIN sequence
Length: 141
MPTINQLVRKSRKAVEYKSNSPALNVSLNTLKKKTNETSSPQKRGVCTSVKTVTPKKPNSALRKIARVRLTNGTEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGTLDTAGVNKRNQSRSKYGTKKPKEAKK*