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scn_reactorb_scaffold_30028_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1789..3651

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 614.0
  • Bit_score: 706
  • Evalue 1.80e-200
1-deoxy-D-xylulose-5-phosphate synthase n=7 Tax=Clostridium thermocellum RepID=A3DDN4_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 614.0
  • Bit_score: 706
  • Evalue 1.30e-200
deoxyxylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 614.0
  • Bit_score: 706
  • Evalue 3.70e-201

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1863
ATGTATAATTTATTAGATAAAGTGAATTGGCCAGAGGATTTACACCAATTTACTTATAAAGAAATGGAATTATTATCTGAGGAAATTAGAAAATTTTTAATAGATACATTATCAAAAACAGGAGGGCATTTAGCCTCTAATTTAGGTGTTGTAGAGCTTAGCATAGCTTTGCACTACGCTTTTGATTTAAAAAAGGATAAGCTTATCTGGGATGTAGGACATCAGTCATATATACATAAAATATTGACAGGCAGAAAAGACATGATGAATACAATAAGACAAATTGATGGACTCAGCGGTTTTCCTAAGAGAGAAGAAAGCGAATATGATGTTTTTGATACCGGACATAGCAGTACATCTATATCAGCAGCTATTGGTATTGCGAGAGCAAGGGATTTGCAAGGAGAGGACTATAATGTCTTGGCACTTATAGGTGACGGAGCCATGACTGGCGGTATGTCCTTTGAGGCATTAAATGATGTAGGTAAAAATAATACCAAGCTAATAGTAATATTAAATGATAACGGAATGTCTATATCCGAAAATGTTGGAGGATTATCAACACATTTAAGCAAAAAAAGAACAAATTCAGGTTATCTTAATACTAAAAAGGATTTGGAAAATATTCTTATTAAAATGCCGAAACTTGGAAAATCAATAAAGAATTTTCTTCGCAGAATAAAAGAAGGTATCAAAAAAATGATACTTCCAAACATGATTTTTGAAGAGCTTGGCTTAACCTATTTGGGACCTATAAACGGACACGATATAGAAGAGTTAGTAGATGTATTTGAAAGAGCAAAGCGCGTCAAAGAGCCTGTGCTTATACATGTCTGTACTAAAAAGGGTATGGGCTATGAATTTGCTGAACAAAATCCTGATGAATATCATGGAGTATCTGCCTTTAACATAGAAACAGGTGAGGCAACAAATAAAGCAAGCTCATTATCATACTCAGATATGTTTGGAAAAAAACTTTGTGATATGGCACAAAAAAATGATAAGATTGTTGCTATATCAGCAGCAATGATTGACGGAACTGGATTGTGTGAATTTAAAGAAAAGTTTCCAAATAGAATATTTGATGCAGGAATAGCAGAGCAGCATGCTGTGACAATGGCAGGGGGGTTCGCTGTAAATGGCATCATACCAGTTGTAGCTTTATATTCATCATTTTTGCAAAGAGCTTATGACCAAGTAGTACATGATATAGCAACTCAAAATCTCCATGTTGTTTTTGCTGTAGACAGAGCGGGAATTGTAGGAAATGATGGTGAAACACATCAAGGATTGTTTGACAGTGGATTTTTAACGCAATTGCCAAATATGACAGTCATGGCACCGGCTGATTATAACGAGTTAAATTCAATGCTGGAATTTGCAGTCAATAAATTTAACGCACCTATAGCAATAAGATATCCAAGAGGCTCAAGTCTTGAAAACATACCAAATTCTACGAAAGAAATAGAGCTTGGAAAAGGTGTAATTGTTAATGAAGGAAATGATATAACAATTATAGCCTATGGCAAAATGCTTGAATTGGCAATTGAGGCTGCAAATAAGCTTAAAAATGACAATATAAGTGCAGAAATATTAAATTTAAGATTTTTAAAACCACTTGACACAGATCTTATTTTGAAATCTTCTGTAAAAACAAAAAAGGTCTTAATAATTGAAGAAAATTGTATAGGAGCAGGAATTTTAAATAATATAATATCTATATTGCCCAAAGATACCGAATATTGCACAAAAACATTCCCTGATATCTTTATTAAGCACGGAAATGTTGGACATATATATAAGAAATATGGCTTTGAGGCCGATAGTATAGTAAAAGAAGTTAAAAACAAATTTGAAATTTGA
PROTEIN sequence
Length: 621
MYNLLDKVNWPEDLHQFTYKEMELLSEEIRKFLIDTLSKTGGHLASNLGVVELSIALHYAFDLKKDKLIWDVGHQSYIHKILTGRKDMMNTIRQIDGLSGFPKREESEYDVFDTGHSSTSISAAIGIARARDLQGEDYNVLALIGDGAMTGGMSFEALNDVGKNNTKLIVILNDNGMSISENVGGLSTHLSKKRTNSGYLNTKKDLENILIKMPKLGKSIKNFLRRIKEGIKKMILPNMIFEELGLTYLGPINGHDIEELVDVFERAKRVKEPVLIHVCTKKGMGYEFAEQNPDEYHGVSAFNIETGEATNKASSLSYSDMFGKKLCDMAQKNDKIVAISAAMIDGTGLCEFKEKFPNRIFDAGIAEQHAVTMAGGFAVNGIIPVVALYSSFLQRAYDQVVHDIATQNLHVVFAVDRAGIVGNDGETHQGLFDSGFLTQLPNMTVMAPADYNELNSMLEFAVNKFNAPIAIRYPRGSSLENIPNSTKEIELGKGVIVNEGNDITIIAYGKMLELAIEAANKLKNDNISAEILNLRFLKPLDTDLILKSSVKTKKVLIIEENCIGAGILNNIISILPKDTEYCTKTFPDIFIKHGNVGHIYKKYGFEADSIVKEVKNKFEI*