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scn_reactorb_scaffold_23465_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2..655)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B578_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 225.0
  • Bit_score: 173
  • Evalue 1.40e-40
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI73294.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 225.0
  • Bit_score: 173
  • Evalue 2.00e-40
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 218.0
  • Bit_score: 134
  • Evalue 2.70e-29

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Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGAAAGTATAGCAAAATAATTGCTTTATTAGTGATGGTAATGATGTTGTTTTCTGCTTGTAAAGCGGCAAACAACGATTCAGATCAGGACAAGTCAGGACAAGATAACACAGGTGAAAATAAAGTTGCCAAAGATACGCTTACAATTGGCGTATGGGAAGATTTAGCAACTATGGACCCTCAATCATCAAACAGAGCGAGCAACTGGATGGTTCAAAGAATGATTTTTGATAAGCTTGTAAATGAAAAAAGTGATGGAACTGTTGAACCAAGACTTGCTAAAAGCTGGAAGCTTCTTGATGATTTAACTTTAGAGATGAATTTAAGAGATGATGTTTATTTTACAAACGGCGAAAAGTTTACAGCAGCCGATGTATTGTTTACATTCGAAAGAGGTCTTGCAAATCCTATAACAGCTTCAACTTTCAAATATATTGATGTTGCTAATACAGAAATAATAGATGAGTACACTATCAAAATAAAATTTACTGCTCCTTATGCAGCTATATTCAATACTCTTTCAGGTGGCAGAGGAAGTATAGTTTGTAAGAAGGCTGTAGAAGAGATGGGAGAAGCAGCTTATGCTCGTAACCCAGTAGGAACAGGACCATATAAATTGCAATCATGGGAATCAGGTTCACAAATTACATTG
PROTEIN sequence
Length: 218
MRKYSKIIALLVMVMMLFSACKAANNDSDQDKSGQDNTGENKVAKDTLTIGVWEDLATMDPQSSNRASNWMVQRMIFDKLVNEKSDGTVEPRLAKSWKLLDDLTLEMNLRDDVYFTNGEKFTAADVLFTFERGLANPITASTFKYIDVANTEIIDEYTIKIKFTAPYAAIFNTLSGGRGSIVCKKAVEEMGEAAYARNPVGTGPYKLQSWESGSQITL