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scn_reactorb_scaffold_23465_7

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5173..6102)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 290.0
  • Bit_score: 475
  • Evalue 4.50e-131
rho; transcription termination factor Rho (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 287.0
  • Bit_score: 461
  • Evalue 1.00e-127
Transcription termination factor Rho n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYJ7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 290.0
  • Bit_score: 475
  • Evalue 3.20e-131

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 930
CCAGAATTAGCACGTAATAGGAAGGATTTTGATTCTTTAATCCCTATCTATCCTGACCAAAGAATAAGACTTGAATCAAATCCAAGAGATATTGCCATGAGAATTATAGATTTGATTGCCCCTATCGGCAGAGGTCAAAGAGGTATGATAGTTGCTCCTCCTAAGGCAGGAAAAACAACAATTTTGAAAAATATTGCCAATTGCATCTCTAAAAACAATCCAGAGATAGAAATAATAATTTTATTGATTGATGAAAGACCGGAGGAAGTTACTGATATGAGCAGGTCGGTTAATGCTGATGTAGTATACTCTACCTTTGACGAGCTTCCGAAAAATCATATAAAGGTTGCTGAAATAGTTTTAGAAAGAGCAAAAAGATTGGTTGAGCATGGAAAAGATGTTGTTATACTGCTTGACAGCATTACAAGACTTGCCAGGGCATATAACTTAACAATCCCGCCAACTGGAAGAACACTTTCTGGAGGACTTGATCCGGGGGCATTACATAGTCCAAAAAGATTTTTTGGAGCAGCAAGAAACATAGAAAATGGCGGAAGCTTGACTATACTTGCCACAGCACTTGTTGAAACAGGAAGCAGAATGGATGATGTAATTTTCGAGGAATTTAAGGGTACAGGCAATATGGAAATACATCTTGACAGGAAGCTGTCTGAAAAACGTGTATTCCCGGCTCTTGACATAAACAAGTCAGGAACAAGAAGAGAGGATTTGCTTTTGACTAGCGAAGAATTGCAGGCAATTTGGCAAATAAGAAAGGCTTTAAGTAATTTCCAGACAGTTGATGTTACAGAAAGACTTTTAGACGGATTATTAAAAACTAAGACTAACAGTGACTTCATCAAGGAATCAGCTACAATATTTAATTTAGAAAAAAAGAAGTCTGAAAATACTGAAAAAAGCTATTACTAA
PROTEIN sequence
Length: 310
PELARNRKDFDSLIPIYPDQRIRLESNPRDIAMRIIDLIAPIGRGQRGMIVAPPKAGKTTILKNIANCISKNNPEIEIIILLIDERPEEVTDMSRSVNADVVYSTFDELPKNHIKVAEIVLERAKRLVEHGKDVVILLDSITRLARAYNLTIPPTGRTLSGGLDPGALHSPKRFFGAARNIENGGSLTILATALVETGSRMDDVIFEEFKGTGNMEIHLDRKLSEKRVFPALDINKSGTRREDLLLTSEELQAIWQIRKALSNFQTVDVTERLLDGLLKTKTNSDFIKESATIFNLEKKKSENTEKSYY*