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scn_reactorb_scaffold_23562_12

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(6584..7477)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9R8_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 299.0
  • Bit_score: 423
  • Evalue 1.10e-115
Transcriptional regulator {ECO:0000313|EMBL:EXG85992.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 299.0
  • Bit_score: 431
  • Evalue 9.30e-118
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 299.0
  • Bit_score: 423
  • Evalue 3.00e-116

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Taxonomy

Clostridium sp. ASBs410 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGAATATTAATAATTTTAAGATGTTTGTAAAAATAGTAGAAACTAGAAGTATATCAAAGGCTTCAGAACAGATGAATATCAGTCAATCGGCTTTGAGTCAGCAATTGCGTGTAATGGAGCAGGAATTTGGTGCAACACTTCTTGAAAGAAGCTATAACGGTGTTGTTCCAACTGATATTGGCATAATCTTTTATAACTATGCTTTAGAAATACTATCATCATTTGACAGAATGTCCAGCGATATATCTAATGCAAAAAATCAGCACAAGACTATAAAAATACTGGCTACTCCTTGTGCCTACTCATACGCACTACCATGTACCTTCTATCATCTTAAAAATAACTATCCCGAATACTCACTCCAAGTAGAGGTTATGTCAAGCAATACAATTGATGAGAAAATGTCAAAAGGGCAAGCAGATATGGGCATTATCATTGGAAAACCAATTAATAAAAATTTATCTGCAAAAAAGGTAATTTCAGATAAGGTTTTTTTAGTTGCCGGAGAAAAGATGAATGTTCCAGCAAAGCTGAAATGTCATGAGTTATATGATTATCCTCTTCTTGTTTTGAATGAAATTCATAAATCAAGGAAGATATTAGATACCATGTTAAAAAGAATCGACATATCTATTAATAAATTACATATCCCCTACACCTTAGAATCAACCGAATCTATTAAGCTGTCAGTAATTAACGGTTTTGGATTAGCCTTTCTTCCATACATGGCTATAAAAAAAGAAATTTATAATAAGCAGCTGCGTATTGTAGAATATCCATGTGCGGAATTTATAAATGAATATTATTCAATAAAAAATAAGAATAGCGAAAATTGCAGCTTGTCAAAGCTTATTAAATATATTGAAACAATATTAAAAGAAACTATTTGTTAG
PROTEIN sequence
Length: 298
MNINNFKMFVKIVETRSISKASEQMNISQSALSQQLRVMEQEFGATLLERSYNGVVPTDIGIIFYNYALEILSSFDRMSSDISNAKNQHKTIKILATPCAYSYALPCTFYHLKNNYPEYSLQVEVMSSNTIDEKMSKGQADMGIIIGKPINKNLSAKKVISDKVFLVAGEKMNVPAKLKCHELYDYPLLVLNEIHKSRKILDTMLKRIDISINKLHIPYTLESTESIKLSVINGFGLAFLPYMAIKKEIYNKQLRIVEYPCAEFINEYYSIKNKNSENCSLSKLIKYIETILKETIC*