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scn_reactorb_scaffold_53632_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3896..4207

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000288ABA6 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 102.0
  • Bit_score: 148
  • Evalue 3.00e-33
Uncharacterized protein {ECO:0000313|EMBL:EPD61683.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 104.0
  • Bit_score: 147
  • Evalue 9.30e-33
transcription regulator (putative) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 102.0
  • Bit_score: 144
  • Evalue 9.30e-33

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Taxonomy

Coprococcus sp. HPP0048 → Coprococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 312
ATGGTATTTCAATTAGGTTCAGCATTGCTGGACGCATGTGTTTTGTCGGTATTAGCCAGAGAGGATGCATATGGATACAAATTGACACAGGAAGTTCGAGAGGTCATAAACATATCAGAATCTACACTATATCCAGTCCTTAGGAGATTACAAAAGGATGAGTGTTTAGAAACATATGATATGCCTTATCAAGGGCGCAATAGAAGATATTATAAAATCACTACAAGAGGCAAGGATGTGCTTGACGTGTATTTAGAAGAGTGGAAATTATATTCAGAAAAAATTAATAAGGTTTTTTATGGAGGGAGATAA
PROTEIN sequence
Length: 104
MVFQLGSALLDACVLSVLAREDAYGYKLTQEVREVINISESTLYPVLRRLQKDECLETYDMPYQGRNRRYYKITTRGKDVLDVYLEEWKLYSEKINKVFYGGR*