ggKbase home page

scn_reactorb_scaffold_54169_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1..666

Top 3 Functional Annotations

Value Algorithm Source
THUMP domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY54_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 222.0
  • Bit_score: 202
  • Evalue 2.80e-49
THUMP domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 222.0
  • Bit_score: 202
  • Evalue 8.10e-50
THUMP domain protein {ECO:0000313|EMBL:ABX06936.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 222.0
  • Bit_score: 202
  • Evalue 4.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herpetosiphon aurantiacus → Herpetosiphon → Herpetosiphonales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 666
ATAAACAAAGAGTTGGCAAATGCAATAGAGCAGGAGGGCTTTAAATTAGATGTTAAGTCTCCAGAGCAGGTTGTTTCAATTTTTATTACTGAAAATTCAGCATTTATTGGGATATCCTTGACAAAATGCAATTTAAGCAGCTGGTCTGGTGGAGAATATAAATTCAGAAAGGACGAAAGCTTGATTAGCAGAGCAGAGTTTAAGCTTTTAGAGGCTATTGATGTATTTAATCTGGATTTTAGCAACTATAAAGTCGGATTGGATTTAGGTGCAGCCCCAGGTGGTTGGACTAAGGTTTTATTAAAATACAATTTAAAGGTTACCGCCGTAGATCCTGCAGAGCTTAATCCTATTATAGCAAAAAATGAAAATGTTCATCACTTCAAAGGTCTTGCACAGGATTATTTGAAGGGTAATAATAAATTTGATGTCATTGTCAATGATATGAGAATGGATGTAAAGGAATCAGTTTCTTTGATGGGTATAGCATCTGAATATTTAAACCCTGATGGAATTGCAATTATGACACTAAAGCTGCCAACAAAAAAAGTACAGGCGATTACTAATAATGCAATAGAAAAATTACAAGGCTGGTATGATATCTATGGAGCGAGACAATTATTCCATAATCGCTCAGAAGTCACAGTTGTATTAAAGAGGAAATAA
PROTEIN sequence
Length: 222
INKELANAIEQEGFKLDVKSPEQVVSIFITENSAFIGISLTKCNLSSWSGGEYKFRKDESLISRAEFKLLEAIDVFNLDFSNYKVGLDLGAAPGGWTKVLLKYNLKVTAVDPAELNPIIAKNENVHHFKGLAQDYLKGNNKFDVIVNDMRMDVKESVSLMGIASEYLNPDGIAIMTLKLPTKKVQAITNNAIEKLQGWYDIYGARQLFHNRSEVTVVLKRK*