ggKbase home page

scn_reactorb_scaffold_54169_6

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5631..6389)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 329
  • Evalue 3.20e-87
Signal transduction histidine kinase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y197_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 239.0
  • Bit_score: 318
  • Evalue 3.10e-84
signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 236.0
  • Bit_score: 313
  • Evalue 3.70e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
GAGGGGCTTGACAAGGCTGTCAAAAATGAGGTTAAGAGCCAAAGGATGAAATCAGAGCTAATATCAAATGTTTCACACGATATAAAAACTCCTTTGACTTCAATTATAAACTATGTTGACCTGTTAAAAAAAGAGGGAATAGGTTCAGAAAATGCTTCTAAATATCTTGATATATTAGAGCAAAAATCACAAAGACTTAAAGTTCTTACTGAGGATTTATTTGAAGCGGCTAAGGCTTCAAGTGGAGATATGCCGATTGAGCTTGAAATGCTTGATATTTTCTCACTTATTCAACAGGGCTTGGCGGAGTTAGACGACAGGATTGAAGAATCGGGACTTCATTTTAAGGTGAACATTCCAGAGGAAAAAACATATGTAATGGCAGACGGCAGATTGCTTTGGAGAGTTATAGAAAATCTTTTGTCAAATGTATTTAAGTATGCTCTAAAAGGCTCGAGAGTTTACATAAATGTGATTAATAGTAAAAGCTCTAACGAGATATCACTCGTGATTAAAAATATTTCATCATATGAGCTAAATGTTGAGGTAGATGAGCTTATGGAAAGATTTAAAAGAGCAGATGAATCAAGAAGCAGTGAGGGAAGCGGCTTAGGCTTAGCAATAGCTAAGGATTTGATGGAAATGCAAAAGGGAAGCTTGAATTTAGAAATAGACGGAGATTTATTTAAGGCGATAGTGAATATACCTAAATGCGAGCCTGAGCCTTTGGAAGATGTAGTAGAGGCAGAAATTGTATAG
PROTEIN sequence
Length: 253
EGLDKAVKNEVKSQRMKSELISNVSHDIKTPLTSIINYVDLLKKEGIGSENASKYLDILEQKSQRLKVLTEDLFEAAKASSGDMPIELEMLDIFSLIQQGLAELDDRIEESGLHFKVNIPEEKTYVMADGRLLWRVIENLLSNVFKYALKGSRVYINVINSKSSNEISLVIKNISSYELNVEVDELMERFKRADESRSSEGSGLGLAIAKDLMEMQKGSLNLEIDGDLFKAIVNIPKCEPEPLEDVVEAEIV*