ggKbase home page

scn_reactorb_scaffold_54294_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(4172..4765)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 196.0
  • Bit_score: 214
  • Evalue 6.90e-53
UPI0002D82351 related cluster n=1 Tax=unknown RepID=UPI0002D82351 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 195.0
  • Bit_score: 223
  • Evalue 1.40e-55
D-alanine--D-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 187.0
  • Bit_score: 204
  • Evalue 1.40e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] dolichum → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
GTGAAAAATGAAGCAAAGCTTGATACAAAAGCTGCATATGAGGAAGCCTTAGCAAAGCTTTCACTTCCTATGTTTATGAAGCCAGCCAATACAGGCTCGTCTCATGGTATAAGTAAAATAAGAAGCTATGAGGAATTTTTAGATGGATTAAAATTAGCTTTTAAATACGATACAAAAGTAGTTTTAGAAAAAACTATAGAGGGATTTGAAATCGGATGTGCAGTTTTAGGAAATGATGAGCTAATGATTGGTGAGGTTGATGAAATCGAAATGTATCACGAATTTTTTGACTATGATGAAAAATATCATTCAACTACATCAAAAATACATTGTCCTGCTCGTATAAGTGACGAGTTGAAAAGCAAGGCAAAGGAAATTGCATATAAGGTCTATAAGGCTTTAAGTTGCAGCGGCTTAACAAGGGTTGACATGTTCTTGACTCCTAGCAATGAAATAATTTTAAATGAAGTGAATACAATCCCAGGACTTACAAATATAAGCAGATATCCATCAATGCTAAGAGTTGGTCTGAAAATGGGATATACAGAGTTTATAGAAGAGCTTGTAAAGCTCGCAATGAGTAAAGAAAAATAA
PROTEIN sequence
Length: 198
VKNEAKLDTKAAYEEALAKLSLPMFMKPANTGSSHGISKIRSYEEFLDGLKLAFKYDTKVVLEKTIEGFEIGCAVLGNDELMIGEVDEIEMYHEFFDYDEKYHSTTSKIHCPARISDELKSKAKEIAYKVYKALSCSGLTRVDMFLTPSNEIILNEVNTIPGLTNISRYPSMLRVGLKMGYTEFIEELVKLAMSKEK*