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scn_reactorb_scaffold_45926_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1..363

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DCF4_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 118.0
  • Bit_score: 90
  • Evalue 6.60e-16
Uncharacterized protein {ECO:0000313|EMBL:EGA95507.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 118.0
  • Bit_score: 90
  • Evalue 9.20e-16
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 117.0
  • Bit_score: 58
  • Evalue 1.00e-06

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Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 363
CTTGAAAATCCGACTGAAATTGATTTTAAAGCTATTGAAGACGAAAAATTTATACTTCTTCCTCAGCCTAACAATATGCGAAAGATTGCTGATGAGATTTTCAACGATTGGGAAATATCTCCTTCAAACATTTTAAATGTTCCAGGTTTAAACATGGCTATTGACCTAGTATCTGCAAATATGGGATTGACCTTTGTATGTAAATCAACAATAAAATATAAAAAATTGGAAAACCCTGTGATTTATTTCACAGTAGGCAAATTAGAGAGCATGGCATCAATAATAATAAGCTACCACAGCACAAATGATAATCCAATGATAAACAAATTCATTGAAATATCAAAGCAAAATTTTCCAAATTAA
PROTEIN sequence
Length: 121
LENPTEIDFKAIEDEKFILLPQPNNMRKIADEIFNDWEISPSNILNVPGLNMAIDLVSANMGLTFVCKSTIKYKKLENPVIYFTVGKLESMASIIISYHSTNDNPMINKFIEISKQNFPN*