ggKbase home page

scn_reactorb_scaffold_49930_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(155..1060)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CJS4_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 299.0
  • Bit_score: 351
  • Evalue 6.80e-94
ABC transporter ATPase {ECO:0000313|EMBL:CEN77886.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 303.0
  • Bit_score: 353
  • Evalue 1.90e-94
sodium transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 299.0
  • Bit_score: 328
  • Evalue 1.30e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 906
ATGCAGATTAATGTAAATAATATTTACAAAACATTTGGAGATAAAAAGGTGCTTGAAGGTGTTTCTTTATCTTGTGAGAGTGGTAAGGCATTGGGACTGCTTGGCAGAAATGGTGCGGGTAAAACAACAACCATACGTATTATTATGGGGATATTTCCGGCAGATAGTGGAGAAATCTTATTAGATGGAAAGCCTATAAACAGAAACAAACTAAAAATAGGGTATTTGCCGGAGGAAAGAGGACTTTATCCCAAGAAAATTGTAATGGAGCAGCTTGTGTATTTAGCTGAACTAAGAGGTCTAAAATCAAGTGAGGCTAAAAAATCAGCGAGAGAGCTAATGGAAAAGCTGGAAATGACGGAGTATGAGAATAAAAAATTAGATACGCTGTCAAAAGGAAATCAACAGAAAATTCAGCTTATAGCGACCTTGACCTGCAATCCTGATATAGTTATCCTAGATGAACCATTTTCAGGACTTGATCCGGTTAATGCTATGCTTCTTAAAGATACAGTAAAGGAATTAATAGCAAAAGGTAAAATAGTAATATTTTCCAGTCACCAAATGAATTATGTAGAGGAATTTTGTAATGATATTGCCATTATAAACAATGGTAAAATTGTTAGAGATGGAGAAATAGCTAAAATCAAAAAATCCTATGCCAGAAACAAAATCGTACTTGACGGGCTTAACTTGGATAAGGTTAAAGCATTTTTGGACGATAGACTACAGGATTTAGTGCAAAATACTCAAATAGACAAAGCAGGTCTGCTTGTTGAGCTGAAAAATGCAGATATGAAAAATAGGCTTATGAGTTCACTTGCAGGTGAGAGCTTTGATATTGATAAGTTTTATGTATATGAGCCGTCACTTAGTGATATTTTTGTTAAGTATACAGAGAACTAA
PROTEIN sequence
Length: 302
MQINVNNIYKTFGDKKVLEGVSLSCESGKALGLLGRNGAGKTTTIRIIMGIFPADSGEILLDGKPINRNKLKIGYLPEERGLYPKKIVMEQLVYLAELRGLKSSEAKKSARELMEKLEMTEYENKKLDTLSKGNQQKIQLIATLTCNPDIVILDEPFSGLDPVNAMLLKDTVKELIAKGKIVIFSSHQMNYVEEFCNDIAIINNGKIVRDGEIAKIKKSYARNKIVLDGLNLDKVKAFLDDRLQDLVQNTQIDKAGLLVELKNADMKNRLMSSLAGESFDIDKFYVYEPSLSDIFVKYTEN*