ggKbase home page

scn_reactorb_scaffold_52278_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(849..1163)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family id=1805439 bin=GWE2_Firmicute_51_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 103.0
  • Bit_score: 69
  • Evalue 1.80e-09
Tax=BJP_IG2103_Clostridiales_50_15 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 101.0
  • Bit_score: 118
  • Evalue 4.70e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2103_Clostridiales_50_15 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 315
TATATAGATTATTTCTTCAAACACCCAAATGTATTTAGGTTTTTCTACTTTTATCCTTTTGTTCAGCCGGATGGAGATGACAGTTATCAAAAACTTGAGCAGCGATTTCAGGGAATGTGGCAAACTTCCTTTTCTAGATTAATCAATGAAGATATTATAAAAATCGATGATATTGAAGTTGTTGCTAAAACTGTTATTTATACCTTGCAGGGCGGGATTATGCTGAGTTTTTCATCTAATGGTAGTACAAAAAAAGAGGATATAAAAAATGAACTCAATAAGCTTGTAAATTACTTATTCAAAAAAAGTTATTAA
PROTEIN sequence
Length: 105
YIDYFFKHPNVFRFFYFYPFVQPDGDDSYQKLEQRFQGMWQTSFSRLINEDIIKIDDIEVVAKTVIYTLQGGIMLSFSSNGSTKKEDIKNELNKLVNYLFKKSY*