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scn_reactorb_scaffold_52434_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2533..3219)

Top 3 Functional Annotations

Value Algorithm Source
sdhB; L-serine dehydratase, beta chain (EC:4.3.1.17) similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 224.0
  • Bit_score: 244
  • Evalue 1.90e-62
L-serine dehydratase, beta chain {ECO:0000313|EMBL:AGX41738.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AGX41738.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 224.0
  • Bit_score: 244
  • Evalue 9.50e-62
L-serine dehydratase, beta chain n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMI2_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 224.0
  • Bit_score: 244
  • Evalue 6.70e-62

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Taxonomy

Clostridium saccharobutylicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAAATGAAAAAAGTAAGTAGTATTTTTGATGTTTTAGGACCTATTATGATAGGACCTTCAAGCTCCCATACAGCGGGAGCGGCACGTCTTGCTAAAATAGCAAAAGATATATGCGAAGAAAAAATAGTAATAGCGAAATTTTATCTTCATGGTTCATTTGCAAGAACATACAGAGGACATGGAACTGATAGGGCTCTTGTAGCAGGTATACTTGGATATGAGCCTTATGATGAAAGAATTAGAGAATCCTTGCAAATTGCAGATAAAGAAAATTTGAAATATGAATTTGTTCCGGCTGATTTAGGATTAGTTCATCCAAATACAGTTAAGTTTGAGTTGGAGGATATAAACGGTAAAATAACATATGTTATAGGTTCGTCTGTTGGCGGCGGCGCCGTTGTTATAAGCAAAATTAATGATTTTGACGTTGATTTTACCGGAGATTATGATACAATAATAACCAGACATATTGACAGGAGAGGTATAATAAGTGAGGTTTCCGGTATTCTTGCTCACAATAGAATTAATATTGCCAATATGAAGGTTATAAGAAGTCCCGGAGAGAAAGAGGCTTCAATGGTCATAGAGACCGACAACACTCCTAACGAAAATGTAATTGAGCTGATAAAGGAAATAGATGCGGTAAAGTCAGTAATTGAAATAAAGAAGCAAAGAACAAGATAA
PROTEIN sequence
Length: 229
MKMKKVSSIFDVLGPIMIGPSSSHTAGAARLAKIAKDICEEKIVIAKFYLHGSFARTYRGHGTDRALVAGILGYEPYDERIRESLQIADKENLKYEFVPADLGLVHPNTVKFELEDINGKITYVIGSSVGGGAVVISKINDFDVDFTGDYDTIITRHIDRRGIISEVSGILAHNRINIANMKVIRSPGEKEASMVIETDNTPNENVIELIKEIDAVKSVIEIKKQRTR*