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scn_reactorb_scaffold_75378_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1693..3546

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRE4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 604.0
  • Bit_score: 608
  • Evalue 6.30e-171
ABC transporter, permease protein {ECO:0000313|EMBL:EDN01640.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 604.0
  • Bit_score: 608
  • Evalue 8.80e-171
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 611.0
  • Bit_score: 571
  • Evalue 1.80e-160

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Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1854
ATGGATAATAAAAACAATAAATCTAAAAAGAAAAATGGTATTTTTAAAATGCTGTCAAACGCATTTAAGGGAATGCTTTTTGGAAATAATAAGGTAGAGCTATCTATTTTAGAAGAAGAACAGATGCAAAGTCCTATGAGAACTATGGTAAGAAATTTCTTTTCTAGGAAAATTTCTGTTATTGCATTAGTTGTTTTTCTTGCAATATTTATATTCTGCTTTGTATATACTGCTATTAACCCATATGACAAATATTTCTTGGATATAACTCAAAAAAATATAGGTCCGGGACTTAATTTCCTAAATATTCCTAAAGAACTTGAGGGAAATATAAGAGATATATCTGGTGGTTCTACGTATAGTGTAGGACTAGATAATAATGGGAAAATGTATACTTGGGGAAGTATGGATCCAAAGTTGGCTGAAATTTTAAAGAAAAATCCTCCAAGCCAGTATAAGCTTAAGGCGGTATCTGCTGGACTTAATCATATACTAGCTATAACAGAGGACGGAAAAGCTGTTACATGGGCTCAGAACAGATTTAGTCTGGATAAAATTCCCAGCAGATTAGCTTCGGAAAATAATGTTAAACAGGTTGTAGCAGGATATCAGCTTTCTGCAGTTGTAACAGAAGAAGGAAATGTTTATCTATGGGGAAATGTTAATTTCCTTGGTACATTAAATCAAAACACTATTCCTGAAGATGTTCAGGGAAATGTTGAAAAGGTTGATATAAGTACAGACAACGTTATATTCTTATTAAAAGATGGTACTGTAAGAGTGCTAGGAGCTGAAACTCCAGCACACAATAACGTTCCAGATATTAAAAATGTAGTAGATATCGCTGCAACTGATGATGTTATGGCAGCTATATCAGAAGGAAAAATATACACTTGGGGTAATGTTAGATATGGATTGCAAAATCCTCCAGAAAATATTTCTGGTGATCCAGTTGCTTTATCAGGAGGACGTTCACACTTCCTTGTATTGGATTCAAACGGAAAGGTTTACGCATGGGGAAGAGATACCTTCAAGCAGACAGAGATACCTTCAAGTATTGAAAATGGACAAGTAAAGATTAAAAATATATACACAGGATATTTCCAAAGCTATGCTGTTTCTGAACAAGGAAACACATCTAAATGGGGACTAAAAGGATATATGTTAGGTACAGATGATTTCGGAAGAGATATATTTGCAAGACTTATGGCAGGCGGAAGACTTACTCTTACAGTAGGAGCTGTTGCTATAACTATTCAGGTTGTTCTCGGCGTAATCGTAGGTGGTTTCTCAGGTTTCTATGGTGGTAAGGTTGATAACTTCCTAATGAGATTTGCTGAAATAGTAGGAGCTATACCTTTCCTTCCGATTGCGATGACTTTATCTGTTGTTATTGGAAATAAACTTACTGAAAATCAAAGAGTTTATCTGATAATGTTCATATTGGGTATACTCAGCTGGCCGGGGCTTGCACGTCTTGTCAGAGCTCAGATTTTATCTGAGAGAGAAAAGGAATTTGTTCTTGCAGCTAAAGCGACTGGTATAAAAGAAAGAGTTATTATATTCAGACACATAATACCGAATGTTATAACAGTAGTTATAGTAAACGCTACATTAGGCTATGCTACATCACTGTTGACAGAGTCATCTCTTTCATACTTGGGCTTCGGTGTTCTTGAACCAAATCCGACTTGGGGTAATATGCTTTCAAGCTCTCAGTCATCACAAACTATAGGAACTTTTTGGTGGAGATGGGTATTCCCAGCAACTCTTCTCTCAATATGTACTATTAGTATAAACATGATTGGTGACGGATTGCGTGATGCAATAGATCCTAAGTCAAGTGAACGATAG
PROTEIN sequence
Length: 618
MDNKNNKSKKKNGIFKMLSNAFKGMLFGNNKVELSILEEEQMQSPMRTMVRNFFSRKISVIALVVFLAIFIFCFVYTAINPYDKYFLDITQKNIGPGLNFLNIPKELEGNIRDISGGSTYSVGLDNNGKMYTWGSMDPKLAEILKKNPPSQYKLKAVSAGLNHILAITEDGKAVTWAQNRFSLDKIPSRLASENNVKQVVAGYQLSAVVTEEGNVYLWGNVNFLGTLNQNTIPEDVQGNVEKVDISTDNVIFLLKDGTVRVLGAETPAHNNVPDIKNVVDIAATDDVMAAISEGKIYTWGNVRYGLQNPPENISGDPVALSGGRSHFLVLDSNGKVYAWGRDTFKQTEIPSSIENGQVKIKNIYTGYFQSYAVSEQGNTSKWGLKGYMLGTDDFGRDIFARLMAGGRLTLTVGAVAITIQVVLGVIVGGFSGFYGGKVDNFLMRFAEIVGAIPFLPIAMTLSVVIGNKLTENQRVYLIMFILGILSWPGLARLVRAQILSEREKEFVLAAKATGIKERVIIFRHIIPNVITVVIVNATLGYATSLLTESSLSYLGFGVLEPNPTWGNMLSSSQSSQTIGTFWWRWVFPATLLSICTISINMIGDGLRDAIDPKSSER*