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scn_reactorb_scaffold_36517_8

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 4772..5506

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A 1 (tRNA-uridine isomerase I 1) (tRNA pseudouridylate synthase I 1) (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 244.0
  • Bit_score: 259
  • Evalue 8.00e-67
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CBH22283.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 244.0
  • Bit_score: 259
  • Evalue 4.00e-66
tRNA pseudouridine synthase A n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTS9_CLOSD similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 244.0
  • Bit_score: 259
  • Evalue 2.80e-66

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Taxonomy

[Clostridium] sticklandii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAAAATATTAAACTTACTATTTCATATGATGGAACGAATTATCACGGATGGCAAAAACAAAATGGTGTTGTAACTGTTCAATCAGAGATTGAAGATGCGATATACAGGCTTACTGGTGAAAATTCAGATTTGATAGCTTCTGGTCGTACTGATACTAATGTTCATGCTATTGGTCAAATTGCTAATTTTAAAACTAACAGCAAAATATTTCCCGAGAAATTTTTTGCTGCGTTAAATTCTGCATTGAATGAGGATATTAGAATTATAAAATCAGAGGAAGTAGATTTAGAGTTTAATTCGAGATTTGATGCTAAGAAAAAAACATACCTTTATCAAATTTATAATGGCAGAATATTAAGTCCTTTTTATAGGATGTTTTCATGGCATATACCATATGAGCTTGATTTTCCGCTCATGGAATCAGCCTTGAAGGAGCTTGAGGGTGAATTTGATTTTAAGGCATTTATGTCTTCAAATTCAAGCGTTAAATCAACTATAAGAACAATATACAGTACAAGTATAAAAAAAGAAAATGATATAATAAAAATAGAAATTACAGGCAATGGATTCTTATACAACATGGTAAGAATAATTGTAGGAACTGTTGTTGAAATAGGCAATGGAAAAAGAGACAAGTCCTGTATAAAGGAAGCCCTATACCTTGGACAAAGAAATTTACTTGGTCGGACTGCTCATCCAAAGGGCTTATTTCTTAAAGAAGTAAGGTACTAG
PROTEIN sequence
Length: 245
MKNIKLTISYDGTNYHGWQKQNGVVTVQSEIEDAIYRLTGENSDLIASGRTDTNVHAIGQIANFKTNSKIFPEKFFAALNSALNEDIRIIKSEEVDLEFNSRFDAKKKTYLYQIYNGRILSPFYRMFSWHIPYELDFPLMESALKELEGEFDFKAFMSSNSSVKSTIRTIYSTSIKKENDIIKIEITGNGFLYNMVRIIVGTVVEIGNGKRDKSCIKEALYLGQRNLLGRTAHPKGLFLKEVRY*