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scn_reactorb_scaffold_36674_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3129..3809)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHU7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 157.0
  • Bit_score: 113
  • Evalue 1.80e-22
Integral membrane protein CcmA involved in cell shape determination similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 157.0
  • Bit_score: 113
  • Evalue 5.00e-23
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:CBL33330.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 157.0
  • Bit_score: 113
  • Evalue 2.50e-22

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Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGGAAAGTAATTTCAGAAAAGCTTTAAAAGAAGTAATGGGTATTGATAAATCTGGCAAAACAGAAGATGTTGTTGAAAATAACGAGGTAGCAGCCGATAATACAGTAAATACAGCAGTTAGTGAAAAGCCTGAGTTTAAAGAGCCCGCAGTTTCTCAAATGAGAGACATAACATTAGAATCAGTTAAGGAAGCAGAGCAAAAGAAATCAAGCGGTTTAAGTAATGCGTTTTCATCTCAAAATAATTTTGGACAAAGTACAAATGCATCAGAAACAAGCGTTATTACAAAGACTACAAAAATTGAAGGCTCTATATCTACTGATTCAAACATAATAATTGCAGGAGAAATGATAGGAAATGTTACAAGTGCAAACTCAATAAGCACTACAGGTAAAATTCTTGGAAATATAACTTGCAAGAACTTTGAAGGAAGCAATGCTAAAATTGAAGGAGATATCAAGGTTGAAAATACATTAATAATTAAAAACAACTGTGATATCATAGGAGATATTTCTGCAAAAAGAATCGAGCTGTCAGGAAGAGTAAAAGGAAATATTGTTCTTTCTGGTGAAGTATTTATAGCAAAAGAAGCTTACATAATCGGAAATGTAACAGCAAGTACGATAAGTATAGAAAAGGGTGCTATAATCCAAGGTCTAATTAAAATTAAAACTGAATAA
PROTEIN sequence
Length: 227
MESNFRKALKEVMGIDKSGKTEDVVENNEVAADNTVNTAVSEKPEFKEPAVSQMRDITLESVKEAEQKKSSGLSNAFSSQNNFGQSTNASETSVITKTTKIEGSISTDSNIIIAGEMIGNVTSANSISTTGKILGNITCKNFEGSNAKIEGDIKVENTLIIKNNCDIIGDISAKRIELSGRVKGNIVLSGEVFIAKEAYIIGNVTASTISIEKGAIIQGLIKIKTE*