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scn_reactorb_scaffold_56377_25

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 15886..16605

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramoyl-L-alanine amidase domain protein {ECO:0000313|EMBL:GAE89547.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 199.0
  • Bit_score: 301
  • Evalue 6.80e-79
LysM domain-containing protein id=3419454 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 223.0
  • Bit_score: 296
  • Evalue 1.60e-77
LysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 208.0
  • Bit_score: 273
  • Evalue 5.30e-71

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 720
GTGAATCTGAGAAAACAGATATTTATACACAATGAATGTTACCAAATAGGTGTAACGCATGTTGTAAAGGGCATAATGGTACACTCAACCGGAGCAAATAACACAAATTTAAACAGATATGTCGGCCCTGATGATGGACTGCTGGGTGTTAATGTTAACAATAATCATTGGAATCAATTCAGGCCAAATGACAGGCAAGTATGCGTTCACGCCTTTATTGGAAAGTTAAAGGATGGAAGTATAGCTACCTATCAAACTTTACCGTGGGATATGATTGGTTGGCATTCTGGAACTGGCAGCTTAGGGAATTCTAAAAATGCCAATAATACAGGTTATATTGGATTTGAAATATGTGAAGATAATTTAAGTGATAAAAATTATTTTGATAGTGTTTATAAAGAGGCTGTGGAGCTATGTGCGTATTTGTGCAAGGAATATGACCTCAATCCTATGAATAACATAATTTGCCACAGTGAAGGACATTCAAAAGGAATTGCATCCAACCATGCAGATGTAATGCATTGGTTTCCTAAGTTTGGTAAATCAATGGATATGTTTAGAGATGATGTTTTAGCGGAAATAGCTAGAACCACCACAAAAACTGATAGGGAAAAAGTTCAGGAGTATTTTGGCTTTAATAGTAGTACAATGAGCTTTTTAGACAACCATCCGTATGTTACAGACTTATACAGAAAACTGTCCAAGGATTATAAATCTTGA
PROTEIN sequence
Length: 240
VNLRKQIFIHNECYQIGVTHVVKGIMVHSTGANNTNLNRYVGPDDGLLGVNVNNNHWNQFRPNDRQVCVHAFIGKLKDGSIATYQTLPWDMIGWHSGTGSLGNSKNANNTGYIGFEICEDNLSDKNYFDSVYKEAVELCAYLCKEYDLNPMNNIICHSEGHSKGIASNHADVMHWFPKFGKSMDMFRDDVLAEIARTTTKTDREKVQEYFGFNSSTMSFLDNHPYVTDLYRKLSKDYKS*