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scn_reactorb_scaffold_78169_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 4099..4839

Top 3 Functional Annotations

Value Algorithm Source
cytidine deaminase (EC:3.5.4.5) similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 247.0
  • Bit_score: 197
  • Evalue 2.90e-48
deoxycytidylate deaminase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000289B23C similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 247.0
  • Bit_score: 215
  • Evalue 3.60e-53
Deoxycytidylate deaminase {ECO:0000313|EMBL:EPN60467.1}; TaxID=1194404 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 18807.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 247.0
  • Bit_score: 213
  • Evalue 1.90e-52

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGATTGACGAGAATAGAAACGATAGTGAAATAGTTATTGGAATAATTAAAACCGCTGGAACGCATGTGAGCCATATTATTAGAAATATATCTGATAGATTGAAGAGCTTTCATTATGATACAGTGGTTATTAGTGTTTCTGATGAAATATTATCGGAATTCTCTAATCAAAATATTGATGATCATGCTTGTGAGTTTGATAGGATATCTTATTATATGGACTTGGGAAATAGGATAAGAAGTGAAACTGGAGATTATTCAGCTCTAATGAAAGGGGTTATCTACAAAATATTATTAAGCAGAGATAGTATTGAAAACCCATCTCCGCGTAAACGCGTAGCATATATTGTAGATTCTATAAAGCATCCTGAAGAAGTAAGATTCATGAGGAGAGTATATGGTGTAGGTTTTCATTTGATAGGGGTAACCAGCGTTAGGGATAAGAGATTAGAAAATCTAATCAATGAAAAAAATCTAACTCTTGATCAAGCAAATTATATATTGGAAAGGGATTATGCGGAATCAGTTAATTATGGTCAACGTACACGAGACGCTTTTCAAAATGCAGATTACTTCATTAATGCTACGAATGATGTTGATGAAATTAAAAGTAATATATATCGCTTAATCGATTTGTTGTTTGGAGATCCGTTTAATACACCAACTTTTAATGAATATGCAATGTTTACAGCATATACTTCGTCATTGCGTTCAGCAGATTTGTCAAGGCAAATAGGCTCG
PROTEIN sequence
Length: 247
MIDENRNDSEIVIGIIKTAGTHVSHIIRNISDRLKSFHYDTVVISVSDEILSEFSNQNIDDHACEFDRISYYMDLGNRIRSETGDYSALMKGVIYKILLSRDSIENPSPRKRVAYIVDSIKHPEEVRFMRRVYGVGFHLIGVTSVRDKRLENLINEKNLTLDQANYILERDYAESVNYGQRTRDAFQNADYFINATNDVDEIKSNIYRLIDLLFGDPFNTPTFNEYAMFTAYTSSLRSADLSRQIGS