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scn_reactorb_scaffold_56584_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(921..1835)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF domain) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DZQ4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 27.1
  • Coverage: 221.0
  • Bit_score: 93
  • Evalue 2.60e-16
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 228.0
  • Bit_score: 87
  • Evalue 5.20e-15
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:CCZ24284.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 268.0
  • Bit_score: 87
  • Evalue 2.00e-14

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Taxonomy

Coprobacillus sp. CAG:235 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGAATAAAATGAATTTGAATAAATACAATATTATGTTCAATTATTTTGAACCTTTTGTAACTTGTGAAATTAGACAGGATGAAATTACAAATAAAAATGAGCTATATATAATTTATGCAAATGAACATTTCGTTAAATTTGCAGATGCAGTTTACTCTGATGTTGAAAACAGAAAATTTTCTGATGTTTGCCTTAGCTCAAAGACTTCTATTTTAGATTGGCCTTCAATTCTTATGAACGCTGCCACGACTAATCGATACAAGATAATTGAGCAGTACATAGATTCCATAGATAAATATGCTAGATTTTTCATATTTGGATATGAAGACGGCGTTTTTAATATGATTATACAAGATATAACAGAAAAGAAACAAATCAATAGAATATTACAGGAAAAAAACAGACAAATTGAATATCTGTTAGAGGATTTAAGAATAAAAAATGACATGGATAATGTAACGAAGCTGTATAATTATCAGTTTGTAATGGATAGTCTGGATACAAGTATAAAAAATTATCTTGAAGAAAACATAAGGTTTTCTGTGCTGATGATAGATTTTAAGGATTTTAAGTCATTAAACTTAAATTATAATTCAAAAGAGGCTGATAAGATACTGGCGGAAATAGGAGATTGCATTATTACAAATACAAGAAAAATTGACTTTGGCTGCAGATATTTAGGGGATAAGTTTTTGATAGTTTATAATGATGTTGATACGGATATTGCAAAAATATTATTTGATAGGTTGAAAAAAGGTTTAAAAAAAGTTATAATATTACATGAAAGCCCGGAGATATTTTTTAATGGTGCTGGGATTGATTATTCCGGACAAAAAAAAGAGCATCTGATAATTCAGCTTGAAGAAAAGGTTAAAAAATCAAAATTATTAGGGACAGATGTGATATTGCAGTAA
PROTEIN sequence
Length: 305
MNKMNLNKYNIMFNYFEPFVTCEIRQDEITNKNELYIIYANEHFVKFADAVYSDVENRKFSDVCLSSKTSILDWPSILMNAATTNRYKIIEQYIDSIDKYARFFIFGYEDGVFNMIIQDITEKKQINRILQEKNRQIEYLLEDLRIKNDMDNVTKLYNYQFVMDSLDTSIKNYLEENIRFSVLMIDFKDFKSLNLNYNSKEADKILAEIGDCIITNTRKIDFGCRYLGDKFLIVYNDVDTDIAKILFDRLKKGLKKVIILHESPEIFFNGAGIDYSGQKKEHLIIQLEEKVKKSKLLGTDVILQ*