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scn_reactorb_scaffold_48960_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2279..3655)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 454.0
  • Bit_score: 420
  • Evalue 2.50e-114
rsmB; Ribosomal RNA small subunit methyltransferase B(rRNA (cytosine-C(5)-)-methyltransferase) (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 452.0
  • Bit_score: 411
  • Evalue 2.40e-112
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CRF6_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 454.0
  • Bit_score: 417
  • Evalue 1.50e-113

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1377
TTGACCGATAATTTTAGAATAATTAGTATTGAATCTTTAAAGAAAATTCATCAAAATAATTCTTATTCAAATATAGTTATAAACAATGACATAAAAAAGCTAGATGAAAAATTTCATAATATATATAGAAAAACAGTCCTTGGAGTTGTAGAGAACATTTATTTTTTAGACTATGTAATAAACAAATTTTCATCTACAAAAACTAAAAAGCTCCAGACTGAAATACTTATAGCCTTTAGGCTTGCTATATATCAAATATTTTTTCTTGAAAATTCAAAGGAATTTGTTATAGTAAACGAAAGTGTTGAGTATATAAAGAAAAAAATCGGTATGCAGGCATCAAAGTTTGTAAATGCTGTGCTTAGAAATATACTGAGAAATAAAGAGCAGATTTTAAATGATATGGAGTTATTAAAAAATTCATCAAAGGAATCAGATAAATATGAGTATCTATCTATAAAATACTCATATCCGATTTGGCTTGTAAAAAAGTTTATAGCTCAGTTTGGCAATGATAAAATTGAAGAGGTTTTGCGAAAAAACAATGAAGAGGCTAAATTAAATATAAGAGTAAATACTAATAAAATAAGTAAAGACGAGTTGAAAAATAGATTAGAGCAAAAAAATATTATTTGTACTGATTGTGAAATAGCTCAAAAAGGTATTGCTATTGAAAATGTAAACAATTTAGAAAGCTTGGAAGAATTTAAAAAAGGATTCTTTTCTGTGCAAAGCGAAAGCTCCATGCTTGTAGGACAGGTACTAAATCCAAGGGAAAATTCCCTGATATTAGATATATGTGCAGCTCCAGGAGGCAAGACAATGGACGCGGCAGAAAGACTAAACAGCACCGGAACAGTAATATCAAGAGACTTATATGAGCATAAAATTAATTTAATTAAAAACGATACAAAACGATTAGGCTTAAAAAATATAAAAGCAGAGCTTGCAGACGCTTCAATATTTGATGATAAATTAGAAAATAAATTTGATTACTGTATAGTTGATGTACCTTGCTCGGGGCTTGGTATTATAAGAAGAAAGCCAGAAATTAAATATAACAGACAAGATGATAACAATGACAAGACGTCTCAAGATAAATTATTTGATTTGCAATATAAAATACTGGAAAATGCATCAAGATATTTAAAAATAGGCGGAGAGCTTGTATATTCCACCTGTACAACTGAGAAAAAAGAAAATATTGAGTTAATAAGATATTTTATTGAAAAAAATCCCAATTATGAGATGATAGATATAAGTATTGAAACAAATAGCATATTTGAAACGTCTAAAAAAGGGTATATAGAAATATATCCTCACATACACGATATGGATGGTTTTTTTATTGCTAAGATTAGAAAAAATATGGTATAA
PROTEIN sequence
Length: 459
LTDNFRIISIESLKKIHQNNSYSNIVINNDIKKLDEKFHNIYRKTVLGVVENIYFLDYVINKFSSTKTKKLQTEILIAFRLAIYQIFFLENSKEFVIVNESVEYIKKKIGMQASKFVNAVLRNILRNKEQILNDMELLKNSSKESDKYEYLSIKYSYPIWLVKKFIAQFGNDKIEEVLRKNNEEAKLNIRVNTNKISKDELKNRLEQKNIICTDCEIAQKGIAIENVNNLESLEEFKKGFFSVQSESSMLVGQVLNPRENSLILDICAAPGGKTMDAAERLNSTGTVISRDLYEHKINLIKNDTKRLGLKNIKAELADASIFDDKLENKFDYCIVDVPCSGLGIIRRKPEIKYNRQDDNNDKTSQDKLFDLQYKILENASRYLKIGGELVYSTCTTEKKENIELIRYFIEKNPNYEMIDISIETNSIFETSKKGYIEIYPHIHDMDGFFIAKIRKNMV*