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scn_reactorb_scaffold_48960_9

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(7603..7803)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 60.0
  • Bit_score: 68
  • Evalue 2.70e-09
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 61.0
  • Bit_score: 65
  • Evalue 3.50e-09
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B165_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 61.0
  • Bit_score: 65
  • Evalue 1.20e-08

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 201
ATGCAAAAAATATCAATAGATGAGTTGCTAAGCATGGTAGATAGCAGATATTCATTAGTAACTGTTATATCAAAAAGAGCAAGACAAATTATAGCTGGAGAGGATCCTTTAGTTTACACTAAAACAACAAAGCCTGTTTCAGTTGCAATAGAAGAATTCTATGACCACAAGGTAAAACCAGTATATCCAAGTGAAGAGTAG
PROTEIN sequence
Length: 67
MQKISIDELLSMVDSRYSLVTVISKRARQIIAGEDPLVYTKTTKPVSVAIEEFYDHKVKPVYPSEE*