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scn_reactorb_scaffold_85002_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2..352

Top 3 Functional Annotations

Value Algorithm Source
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 116.0
  • Bit_score: 166
  • Evalue 2.60e-39
Prolipoprotein diacylglyceryl transferase {ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|SAAS:SAAS00117311};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 116.0
  • Bit_score: 166
  • Evalue 1.30e-38
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXA0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 116.0
  • Bit_score: 165
  • Evalue 2.00e-38

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Taxonomy

Eubacterium acidaminophilum → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
AGACAAGACGGCCCTCATCCTGCAAAAAGAACCTTTCAGGCAATACGCATAGAGGTTAACAAAGAGCTTGAAATACTCGAAAAAACTATAAGAAATGCCGTTGATAGATTAAAGCCTGGCGGTCGAATTTGTATAATAAGCTTCCATTCTTTGGAGGATAGAATAGTAAAAAACACTTTTTCGGATTTGAATACTGACTGTGTCTGTCCGAAGGAATTTCCAAAATGTGTTTGTGATCATAGAAGAAAATTAATATTGGTAAATAAAAAACCAATTATATCAGATGATGAGGAATTAGAGGATAATCCAAGGGGAAGAAGTGCAAAACTAAGAATAGGAGAAAGGGTGTAG
PROTEIN sequence
Length: 117
RQDGPHPAKRTFQAIRIEVNKELEILEKTIRNAVDRLKPGGRICIISFHSLEDRIVKNTFSDLNTDCVCPKEFPKCVCDHRRKLILVNKKPIISDDEELEDNPRGRSAKLRIGERV*