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scn_reactorb_scaffold_68149_6

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3843..4331

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FB4386 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 165.0
  • Bit_score: 173
  • Evalue 1.00e-40
2'-5' RNA ligase {ECO:0000313|EMBL:EXM39389.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 161.0
  • Bit_score: 194
  • Evalue 8.00e-47
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 166.0
  • Bit_score: 163
  • Evalue 4.00e-38

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Taxonomy

Ruminococcus albus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGAAAAATAAATTTTTATGTGTAATGGCTGGTTATGACGATGATACAGAGAAATATCTTTCAGAAATTCAGAAAAAGCTATATGAGCAAGGATTTCGCGGCACTCAAACAAAGAATATACCAATGCATATAACATTTGGGACTTTTGATATAGAAAAAGAAGATGAACTTGTGAATTTACTAAGTAGTATTTCACAAAAAACTAATTCTTTTGATATAACATTTAATCATATTGGAATATTTAATGGCTCAAAGGTATTATTTGTTGCTCCAGATACAAGCAAAGACCTGATTGAATTAAAAGAAATGTTTGGGGATACCAGCAATTGGACACCTCATACTACAATGTTAATTGATGAGCCTAATGTTATATTTGAAGCAATGCCTATCGTTATTGATAGTTTCAAATCTTTTAAAGGTAAAGTTGAGAAAATTTATTTATATGAGTTTTGGCCTGCAAGGCATATTTTATCTATTAATCTTTTATAA
PROTEIN sequence
Length: 163
MKNKFLCVMAGYDDDTEKYLSEIQKKLYEQGFRGTQTKNIPMHITFGTFDIEKEDELVNLLSSISQKTNSFDITFNHIGIFNGSKVLFVAPDTSKDLIELKEMFGDTSNWTPHTTMLIDEPNVIFEAMPIVIDSFKSFKGKVEKIYLYEFWPARHILSINLL*