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scn_reactorb_scaffold_110611_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3..860)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D0C8 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 289.0
  • Bit_score: 317
  • Evalue 1.30e-83
putative drug efflux ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 286.0
  • Bit_score: 299
  • Evalue 8.20e-79
Putative drug efflux ABC transporter permease protein {ECO:0000313|EMBL:BAK97453.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 286.0
  • Bit_score: 299
  • Evalue 4.10e-78

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Taxonomy

Oscillibacter valericigenes → Oscillibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGTTTTATACAATCATTCAAGCTAGCCATAAAAAGTATCATGGCAAGTAAAATGCGTTCTCTTCTGACTATGCTTGGTATAATCATAGGTGTTGGGGCGGTTATATTAATCGTCGGCTTAGGAAACGGCATGGAAATATATATGAAGGAAAGCTTTGCCAGCATGGGTACAAATATTTTAACCGTAAATGTGTTTGGCAGAGGAAGCTCCAGAAGCATAGATGCTGAAGATATGTATGCCTTTGTTGAAGAAAACAAAGAGTATTTCGAGGCTGTTTCACCAACTGTATCGGCAAACACAAAAATTAAGGTAGGCAATGAAACCTTGTCAAGAACATCCTTGATGGGAATTGGCGAAGACTACATGAATATGAAAAAATTAAAGCTGGAATCAGGAAGATATATACAGTATGTTGATGTTATTAAAAGAAATAAGGTATGTGTTGTCGGACCTTATATAAGCAATACATATTTTATGGGAGATGCGATTGGAAAGACAATAAAAATCAATGGAGATGCCTATAAAATCGTAGGAGTTTTCGCAAAGGATAAAGACGAGGAAAATGAAGAGGGAAGTGCTGGAGATACAGTGCATATTGCATATACAAATGCTGCAAAAATGTCATTTATGGGTACAATTTCTTCATACTCTTTTTCAGTAGTTTCTGAGGATGATATATCAACATCAAAAAAATTACTCAATGATATGTTTTTTAATGTATATAAGAACGAAAGACTATATTCAATTATGAGTATGTCTGAAATTTTAGGTACAATGAGCAGTATGCTTAATGTTATGGTTACAATTTTAGCTTCAATAGCGGCTATATCATTAGTTGTAGGAGGTATAGGCATA
PROTEIN sequence
Length: 286
MSFIQSFKLAIKSIMASKMRSLLTMLGIIIGVGAVILIVGLGNGMEIYMKESFASMGTNILTVNVFGRGSSRSIDAEDMYAFVEENKEYFEAVSPTVSANTKIKVGNETLSRTSLMGIGEDYMNMKKLKLESGRYIQYVDVIKRNKVCVVGPYISNTYFMGDAIGKTIKINGDAYKIVGVFAKDKDEENEEGSAGDTVHIAYTNAAKMSFMGTISSYSFSVVSEDDISTSKKLLNDMFFNVYKNERLYSIMSMSEILGTMSSMLNVMVTILASIAAISLVVGGIGI