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scn_reactorb_scaffold_125627_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3332..4420

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 347.0
  • Bit_score: 381
  • Evalue 1.00e-102
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5S7A2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 347.0
  • Bit_score: 381
  • Evalue 7.30e-103
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 347.0
  • Bit_score: 376
  • Evalue 6.70e-102

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Taxonomy

Clostridium sp. CAG:122 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1089
ATGTTGGATAGAACAGTAAAGGAAATAATAAAATATGAAGAAGGAAAGCCTACAAGCAAGGCAATAAGATGTGGCAATATCTATGTAGGCGGAAATAATAAAATAACAGTTCAGTCTATGTTAAATACAAAATTAAGCGATATAGAAAGCGCGATAGAACAGGTTCAGCTTTTAGAGCTTAATGGCTGTGATATAATACGTGCGTCAATTGATACAGAAGAGGATGCCAAGGCTATAAGCGTACTAAAAGAGCATACTAAAATGCCGGTGGTTGCAGATATTCAATTCGACTATAAAATGGCTCTTTACGCACTTAAAAACGGTGCTGATGCTATAAGAATCAACCCTTGCTACATAGGCTCTGAAGAAAAGGTTGCAAGTGTTATAAACGAATGTAAGCTTAATAATATTCCAATTAGAGTAGGCGTAAATTCAGGCTCTGTTAAAAAGGAATTTGTGGACAAGTATAATGGAATAAATAAGTTTTCTTTAGTTGAGAGTGCATTAGAGCAGGTTGGAATTATTGAAAAATATAATTATGAAAATATTGCAATTTCAATAAAGGCATCTGATGTCAAAATGACTTATGACGCAAATATTGAGCTTAAAAAAAGGATAAATTATCCTATACACCTTGGTATAACTGAATCCGGCTCAGATGAGGACGGTATAATAAAATCTTCAATGGGACTTGGCTCTTTACTGCTGATGGGAATAGGTGATACAATAAGAGTTTCTTTAACAGAGGAGCCTTTGCGTGAGGTAGTAATCGGAAGAAAAATATTGCAGTATCTTGGATTAAGACCATATGGAATAGAGGTAGTTTCTTGCCCTACCTGCGGGAGAACAAATGTTGATTTAATCAATATAGTAAGAGATGTAAAACGCGCTATTTCTCCTATTAAAAAGGACATAAAAATTGCTATAATGGGCTGTGCTGTAAATGGACCGGGAGAAGCAAGAGGTGCTGACATAGGCATAGCAAGCGGTAACGGAGAAGCCTTATTGTTTAAAAAAGGTGAAATAGTAACAAAAGTAAAGGAAAGCGAAATAATTAATGCTCTTTTAGAAGAAATTAATAAATTATAA
PROTEIN sequence
Length: 363
MLDRTVKEIIKYEEGKPTSKAIRCGNIYVGGNNKITVQSMLNTKLSDIESAIEQVQLLELNGCDIIRASIDTEEDAKAISVLKEHTKMPVVADIQFDYKMALYALKNGADAIRINPCYIGSEEKVASVINECKLNNIPIRVGVNSGSVKKEFVDKYNGINKFSLVESALEQVGIIEKYNYENIAISIKASDVKMTYDANIELKKRINYPIHLGITESGSDEDGIIKSSMGLGSLLLMGIGDTIRVSLTEEPLREVVIGRKILQYLGLRPYGIEVVSCPTCGRTNVDLINIVRDVKRAISPIKKDIKIAIMGCAVNGPGEARGADIGIASGNGEALLFKKGEIVTKVKESEIINALLEEINKL*