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scn_reactorb_scaffold_107249_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1648..2361

Top 3 Functional Annotations

Value Algorithm Source
uracil-DNA glycosylase (EC:3.2.2.27) similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 232.0
  • Bit_score: 275
  • Evalue 8.00e-72
Uracil-DNA glycosylase {ECO:0000256|RuleBase:RU003780, ECO:0000256|SAAS:SAAS00032124}; EC=3.2.2.27 {ECO:0000256|RuleBase:RU003780, ECO:0000256|SAAS:SAAS00032124};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 232.0
  • Bit_score: 275
  • Evalue 4.00e-71
Uracil-DNA glycosylase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLE9_CLOSH similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 232.0
  • Bit_score: 275
  • Evalue 2.80e-71

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Taxonomy

[Clostridium] stercorarium → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGGCTGATTAATAATTTTCATTCATCATGGAGTGAATTTTTAAATGAAGAAACTATGAATAAATTGCATGATATAGATACGAAAATAGGCGATAACATAAACCCAGAGCCTAAAAATGTCCTTAGATTTCTAAATAATGATTTAAGCAGTATAAAGGTAGTAATTTTAGGACAGGATCCCTATCCCGAAAAGGGGAGAGCTACCGGAAGGGCATTTGAGGTTGGGGATTTGCATAGCTGGAATGATAAGTTCAGGCAGGTATCTCTAAAAAATATAATAAGATTGATTCATAAAAATTACAATAATATAGAAGCTTACAACGAAATCAGAAAATTTTCATCGATACAGGAGGAAATAAAGTCCGCTAAATTTAACATATTAGCGCCTGATGAGATATTTAAATCCTGGGAAAAACAAGGTGTTTTGTTGCTCAATACATATTTGAGTGTAGAGGCAGGAAAAACGGGCAGTCATATCGACATATGGGAAGACTTTAGCATAAGCCTGATTAAGTATATTTCGGAAAAAAATAAGAATATAAGTTGGTTTTTATGGGGCAAACAAGCAGAGGACAAAGCTCAATATATTACAAGCGGAAAAAAATATATAAGCAGACATCCTATGATGTGTTCGGAAAAATATGAGGATGATTTCTTAAAATCAAACTGCTTTAAGGATACTATGAAGCATATAAATTGGTTAGGCTTATAA
PROTEIN sequence
Length: 238
MRLINNFHSSWSEFLNEETMNKLHDIDTKIGDNINPEPKNVLRFLNNDLSSIKVVILGQDPYPEKGRATGRAFEVGDLHSWNDKFRQVSLKNIIRLIHKNYNNIEAYNEIRKFSSIQEEIKSAKFNILAPDEIFKSWEKQGVLLLNTYLSVEAGKTGSHIDIWEDFSISLIKYISEKNKNISWFLWGKQAEDKAQYITSGKKYISRHPMMCSEKYEDDFLKSNCFKDTMKHINWLGL*