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scn_reactorb_scaffold_109306_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1..1515

Top 3 Functional Annotations

Value Algorithm Source
Putative ATP-dependent RNA helicase n=1 Tax=Clostridium difficile E10 RepID=U3VG67_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 477.0
  • Bit_score: 438
  • Evalue 9.20e-120
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:CCL00665.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 477.0
  • Bit_score: 438
  • Evalue 1.30e-119
ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 477.0
  • Bit_score: 434
  • Evalue 3.80e-119

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1515
GACATCGATGTTAGACGACCACAGGCTATAGCACTTTGCCCAACAAGGGAGTTAGCAGTTCAGGTTGCAAATGAATTCAAAAAAATATCTAAATATATAGAAGGAATTAGAACAGTAAGCGTTTACGGCGGAGCAGATATCAGAGGACAAATTGACAAATTAAAAGGTGGAGCACAGATTATAATAGGCACACCAGGAAGAGTTATAGACCTTATCGATAGGGGAGTTATAAAGCTTGATCAAATTAAGATAACTATACTTGACGAAGCTGACGAAATGCTTAAAATGGGCTTTAAGGAAGATATTGAGCTTATTTTAAGTAAGATAAATCATAAAACTCAAACACTTTTATTCTCAGCAACTATACCAGAGGGTATAATTAAAATAACTAGAGAATTTCAAGAAAATCCAGTTATGATTAAAACCTTGAGAGAGGGTATAACAGCAAAGGAAGTAAAGCAAAGTTACTTTATGGTTAAGCATTCCGACAAAACTGAAGCTTTGATGAGAATAATTGACACATATACAACAAAGCTTGCATTAGTATTTTGCAATACTAAAAGAAGTGTTGATGAGCTGTTTGATATTTTGGTAGATAAAGGTTATAACTGCGATAAAATACACGGAGATATAAACCAAGCTCAGAGATTAGACACACTCAATAAATTCAACAATGGATTAGTTGATGTACTAATTGCAACAGACGTTGCTGCGAGAGGACTTGACATCAAAGAGGTTGAGGCTGTTATTAACTACGAGATACCAAGTAAAGAGGACTACTATGTACATCGTATAGGAAGAACAGGACGTGCCGGAAGAGAGGGCTTGTCATTTACACTTTTAACAAATAAGGAAACGAAAAAGCTTCAAGATATTGAAAGATATACTAAAAAGCCTTTGAGAAAAAGACAGATACCTACTATTGAAAAGGTAAATGAGATAAAGCAGGATAAGTTTATAAGAGGAATTGAAGCGAAAATTGCTAATGGATTAACAGAGGATTACTCTTACATTATCAACAGATTATATGAGAGTGGAAATTCTCCGGAATCAATTATAGCAGCTTTGATTAAGGATAGATTGAGTTTTGAAAATGAAGAAAATGATAAGGATTTAAATGATATAGTTCCGGAAAGATCAGAAAGAAAGCAGTCATCAAGAGGAAGAAATTCTGAAATTGATAAATCGGGAGTAAGATTTTTCCTTAACCTTGGTAAAAAGGATGGAATAAGACCAAGAGATATTTTAGGTGCTGTTGCCGGAGAATGTGACATACCGGGAAATGACATAGGTGAGATTGAAATTTTAGATAAATTCTCATTCTTTACCGCTGCAAAAGAGCATAAAAATACTATCCTTAAGGTGATGAACGATACAACAATCAAAAATAAAGATGTTGTTGTAGAACTTACAACTGCAAAAAGACAAAAGGGCAGTGTATCAGAAGCAAAGTATGGAAATAAGTCTGATAAAAGAAAAGATACCGCTAAATTATATGATAGAAGAAAAAAATAA
PROTEIN sequence
Length: 505
DIDVRRPQAIALCPTRELAVQVANEFKKISKYIEGIRTVSVYGGADIRGQIDKLKGGAQIIIGTPGRVIDLIDRGVIKLDQIKITILDEADEMLKMGFKEDIELILSKINHKTQTLLFSATIPEGIIKITREFQENPVMIKTLREGITAKEVKQSYFMVKHSDKTEALMRIIDTYTTKLALVFCNTKRSVDELFDILVDKGYNCDKIHGDINQAQRLDTLNKFNNGLVDVLIATDVAARGLDIKEVEAVINYEIPSKEDYYVHRIGRTGRAGREGLSFTLLTNKETKKLQDIERYTKKPLRKRQIPTIEKVNEIKQDKFIRGIEAKIANGLTEDYSYIINRLYESGNSPESIIAALIKDRLSFENEENDKDLNDIVPERSERKQSSRGRNSEIDKSGVRFFLNLGKKDGIRPRDILGAVAGECDIPGNDIGEIEILDKFSFFTAAKEHKNTILKVMNDTTIKNKDVVVELTTAKRQKGSVSEAKYGNKSDKRKDTAKLYDRRKK*