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scn_reactorb_scaffold_118505_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3..713

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 231.0
  • Bit_score: 238
  • Evalue 7.00e-60
Shikimate dehydrogenase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RNC5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 231.0
  • Bit_score: 238
  • Evalue 5.00e-60
aroE; shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 226.0
  • Bit_score: 231
  • Evalue 1.30e-58

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Taxonomy

Thermobrachium celere → Thermobrachium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
AAAGATTATTTGCCAAACATAGTAAGCAACTTAAAATATCAGCTTTATAAGGGAGTAAATGTCACTATTCCTTATAAGACTGATATTATTCCTTATTTAGATGAAATAAGTCCTGAAGTAAAGAAGATAGGTGCTATAAATACAATAAAGCTTTTTTCCAATAAAGCAGTAGGATATAATACTGATTACTTTGGCTTTGGAAAGCTTTTAAGCTTTAACAAAATTGATGTTAAGGATAAGACTGCTCTAATACTTGGAACTGGCGGAGCTTCAAGAGCGGTTTGCCGATACTTAGAGGACAAGAATATCAAATCAGTAAAATTTGCAAGCACAGATATTGAACATGCTAAAAGCAAATATTCCGGATATGAAATTTATAGCTATAATGATATTATCACTCTTGGAAAAACAGATATTGTAATTAACTGCACGCCTGTTGGAATGTATGGAAATATAGCTATTGATGCTGATAATACTCCAATTGATAAATCACTTTTGAATAAATTTGATATCGCTATAGATTTAATCTATAATCCTATGGAAACTGAATTTTTAAAGCAAGCAGGAGAGCTTGGATTAAAGACTGCAAACGGACTTTATATGCTGACTGCACAGGCTGTTAAGGCTCAAGAAATTTGGAATGATATAGCAATTGATGACAGTGTAATAGATGAAATCAATAATTTAGTAAAATGTAAAGTAAGGAATTAG
PROTEIN sequence
Length: 237
KDYLPNIVSNLKYQLYKGVNVTIPYKTDIIPYLDEISPEVKKIGAINTIKLFSNKAVGYNTDYFGFGKLLSFNKIDVKDKTALILGTGGASRAVCRYLEDKNIKSVKFASTDIEHAKSKYSGYEIYSYNDIITLGKTDIVINCTPVGMYGNIAIDADNTPIDKSLLNKFDIAIDLIYNPMETEFLKQAGELGLKTANGLYMLTAQAVKAQEIWNDIAIDDSVIDEINNLVKCKVRN*