ggKbase home page

scn_reactorb_scaffold_129505_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2..604)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, effector binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWE8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 165.0
  • Bit_score: 110
  • Evalue 1.30e-21
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:EEG75751.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 165.0
  • Bit_score: 110
  • Evalue 1.90e-21
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 141.0
  • Bit_score: 104
  • Evalue 2.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] hylemonae → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATGTTGAATAACTTTTCTAAAATAGGTGAAGCATTAAAATATATTGATGATAATTTAGACGAAACTATCAATCTTGAAATGCTGTCAAAGAAATTTTTCTTTTCGCCTTTTTACTTTCATAGACTGTTTTCAGTAATCGTTGGGAAATCTCTGGCAGCATATATTCGAGACAGACGAATTCTACATGCCTGCAAACAGCTTAGCTGTACTGAGAGGACTATCTTAGATATTGCTCTTGACAATGGCTTTAACTCGTCACAGTCTTTCTCAAGAACGTTTAAGGAAATTCAGGGGCTATCCCCAAGCGAATACAGAAAATATGGATATCAGCCAGTCATAATAAGTATAGATGAGTTAATCATGAAATTCACCAACAGGTTGAGAGGAGGAATTTTTTTGAACCCAAATATTATTAAACATGACTCAATGATAATTGCCGGAACTCACGGAGATGGAAATGAAACAGGTGATGTGTGGCAAGCTTTTGAAAAACTAAGCAATGAAAAACCACTTAAAAATGCTCTGTCTAAAAATGGATACGAAATCAGGGTATATGACGGAGAAAAATCGACTGTTTATGTGGGATATTCTGTTTCAAGCAAG
PROTEIN sequence
Length: 201
MLNNFSKIGEALKYIDDNLDETINLEMLSKKFFFSPFYFHRLFSVIVGKSLAAYIRDRRILHACKQLSCTERTILDIALDNGFNSSQSFSRTFKEIQGLSPSEYRKYGYQPVIISIDELIMKFTNRLRGGIFLNPNIIKHDSMIIAGTHGDGNETGDVWQAFEKLSNEKPLKNALSKNGYEIRVYDGEKSTVYVGYSVSSK