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scn_reactorb_scaffold_135398_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2337..2828

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 160.0
  • Bit_score: 170
  • Evalue 1.20e-39
chemotaxis protein CheD n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037FA74E similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 164.0
  • Bit_score: 175
  • Evalue 2.80e-41
chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 163.0
  • Bit_score: 157
  • Evalue 2.90e-36

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Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 492
ATGAAAAACACAGTTAACGTAGGAATATCAGATATGAAAATTGTCTCAGCGCCTGATGTAGTTGCAACATATGCTCTTGGTTCTTGCGTTGGTATTTGTATAATTGATAAAATTAGCCAAACTTGTGGACTAGTCCATATAATGCTGCCACAAAATCCAAATCCAGCTGATACAAAGGCTTTATTTAAATATGCAGATACTGGAATCGAAGAAATGATTAAGCAGATGGAGAAAAAAGGCTGTGTCAGGGTGCGTATGACCGCTAAAATAGCAGGCGGAGCGAAAATGTTTGAGGTTAGCGACGATAAAAACAGCAGTATTGGAAACATTGGAGAAAGAAATATAGTAGCTGCCAAAAGCACATTGCAGAAATTAAAGGTAAAATTGATTGCAGAAGATGTAGGATTAAATTATGGAAGAACTATCTTCTTTGACAGTTCAAACGGAGAGTTGACAGTTAAATCATTTGCAAAGGGAAATAAGGTTATATAA
PROTEIN sequence
Length: 164
MKNTVNVGISDMKIVSAPDVVATYALGSCVGICIIDKISQTCGLVHIMLPQNPNPADTKALFKYADTGIEEMIKQMEKKGCVRVRMTAKIAGGAKMFEVSDDKNSSIGNIGERNIVAAKSTLQKLKVKLIAEDVGLNYGRTIFFDSSNGELTVKSFAKGNKVI*