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scn_reactorb_scaffold_135778_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(795..1259)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar capping protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJF5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 166.0
  • Bit_score: 111
  • Evalue 6.00e-22
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:GAE87815.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 166.0
  • Bit_score: 112
  • Evalue 2.90e-22
flagellar hook-associated protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 165.0
  • Bit_score: 103
  • Evalue 4.60e-20

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
GGGGTGGCAGGCTTTGTAGAAGGCCACAATACCCATATGTCAAGCATAGGTATAGCACCTGCATTCGGAGATTATACTGGTAAGCTAGTGTTTGATGAAGACAAATTTAGAAGTGCCTATGCTCAAGATTCAGCTAAAGTTGAAGAGTTTTTTACAAAAAATCCTAAAAATGCATCAACAAATGAAAAAGGTATAGCTCAGAGATTAAAGGATGTTGTTTCAAGAAATGTCGGCATTATGGGAGAAAAAGGTATTCTGGTTGATAAAGCCGGAACAAAAGGAACTTCTAGCGAAAAAAATAATTTCTTGTACGAAAGAATAAAAGAATATGATGATATGATTACAAAGCTAAAAACTAAACTAGCAGCTGAGCAAGAAAGATACTACGCTAAGTTTTCTGCATTGGAACAAGCACTAGCTAAAATGAACAGTCAAAGCTCATGGTTAAGCTCGCAATTTCAGTAA
PROTEIN sequence
Length: 155
GVAGFVEGHNTHMSSIGIAPAFGDYTGKLVFDEDKFRSAYAQDSAKVEEFFTKNPKNASTNEKGIAQRLKDVVSRNVGIMGEKGILVDKAGTKGTSSEKNNFLYERIKEYDDMITKLKTKLAAEQERYYAKFSALEQALAKMNSQSSWLSSQFQ*