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scn_reactorb_scaffold_136140_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 6505..6999

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC24_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 148.0
  • Bit_score: 165
  • Evalue 2.90e-38
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EOC99854.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 148.0
  • Bit_score: 165
  • Evalue 4.00e-38
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 150.0
  • Bit_score: 125
  • Evalue 7.20e-27

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGGAACAAAGCTTTTTATTATTCGTCTATATATGTGAGTGGGGTGGAAAAATGCAAGATTATGAACTTATACTTGTTAAAAAGAGTATAAGCGGCGATGTTGATGCTTTTGAAGAGCTTATCAAGGATTATAAAAAGATGGCTTATAACATTGCATTAAGAGTTTTGCGCAACAAAGAGGATGCTGAAGACATATCTCAAGAAGCACTGATTAAAGTCTTTAAGAATATTGGCTCATTTAATATGAAATCAAGCTTTAAGGTATGGCTGTATAGGATAGTTATGAATACATGCCTTGATTTTAAAAGGAAGAAAAATATCATTACATATTCTATTGATAAACCTCTTGATAACGATGAAAACGAAATAATGCAGGAGATACCAGACAATACATATAATCCAGATATTGTTATTCAAAATGAGTTAGAGTCTCAGATGTTGTATGATAGTATTGACAGCTTAGATGATGACTTCAGGACAGTTATTGTGCTAAGA
PROTEIN sequence
Length: 165
MEQSFLLFVYICEWGGKMQDYELILVKKSISGDVDAFEELIKDYKKMAYNIALRVLRNKEDAEDISQEALIKVFKNIGSFNMKSSFKVWLYRIVMNTCLDFKRKKNIITYSIDKPLDNDENEIMQEIPDNTYNPDIVIQNELESQMLYDSIDSLDDDFRTVIVLR